Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_07025	PS417_07030	PS417_07035	PS417_07040	PS417_07045
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	-0.3	-1.7	+0.1	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.2	-0.1	-1.5	+0.2	+0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.0	+0.1	-1.6	+0.0	-0.0
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.2	+0.0	-1.5	+0.1	+0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2	+0.0	-1.2	-0.1	-0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	-0.3	-1.3	+0.1	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	-0.2	-1.3	+0.2	-0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	-0.3	-1.0	+0.0	-0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	+0.1	-1.3	-0.0	-0.1
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.1	+0.1	-1.3	+0.1	-0.0
phage	P. simiae OR1 MOI 0.1	+0.1	-0.3	-0.8	-0.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.1	-0.2	-0.8	+0.2	-0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.0	-0.1	-0.9	+0.1	-0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	-0.2	-1.3	+0.1	-0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	-0.3	-1.0	+0.2	+0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.1	-0.1	-1.0	+0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-0.6	-0.5	+0.1	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	-0.1	-1.0	+0.2	+0.1
phage	P. simiae ORA MOI 0.1	-0.0	+0.2	-1.1	+0.1	+0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	-0.2	-0.5	+0.0	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.1	+0.4	-0.7	+0.0	+0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	-0.5	+0.6	-0.2	+0.1
carbon source	2'-Deoxyinosine 5 mM (C)	-0.4	+0.5	-0.0	+0.1	-0.2
nophagecontrol	Only library	-0.6	+0.4	+0.1	+0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.4	+0.5	+0.0	-0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.1	-0.3	+0.8	+0.0	+0.2
solid stress	Fraxetin 3 mM; solid stress	+0.4	+0.3	+0.4	+0.0	-0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	+0.1	+0.5	-0.1	+0.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	+1.1	+0.1	+0.0	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	+0.6	+0.6	+0.2	-0.2