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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1382 and GFF1383 are separated by 31 nucleotides
GFF1383 and GFF1384 are separated by 3 nucleotides
GFF1384 and GFF1385 are separated by 61 nucleotides
GFF1385 and GFF1386 are separated by 102 nucleotides
GFF1382 - Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein, at 728,334 to 729,131
GFF1382
GFF1383 - Hypothetical protein in cluster with At3g50560-like gene family, at 729,163 to 730,023
GFF1383
GFF1384 - Nitrilotriacetate monooxygenase component A (EC 1.14.13.-), at 730,027 to 731,358
GFF1384
GFF1385 - Multidrug resistance transporter, Bcr/CflA family, at 731,420 to 732,634
GFF1385
GFF1386 - Uncharacterized transporter YebQ, major facilitator superfamily (MFS), at 732,737 to 734,095
GFF1386
Group
Condition
GFF1382
GFF1383
GFF1384
GFF1385
GFF1386
complex community
Community=arabino-guar; Passage=4
N.D.
-0.6
+0.4
-0.5
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
-0.0
-0.3
-0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
-0.0
-0.2
+0.2
-0.5
complex community
Community=Locust bean gum; Passage=4
N.D.
+0.0
-0.0
-0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
+0.1
-0.3
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
+0.0
-0.3
+0.3
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
+0.3
-0.4
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
+0.1
-0.2
+0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
+0.1
-0.3
-0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus
N.D.
+0.1
+0.0
+0.1
-0.4
phage
phage_bap4
N.D.
+0.2
-0.4
-0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
+0.1
-0.2
+0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
+0.1
-0.2
+0.2
-0.1
phage
phage_bap4
N.D.
-0.0
-0.3
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
+0.2
-0.2
-0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
N.D.
+0.3
-0.0
+0.2
-0.4
complex community
Community=guar; Passage=4
N.D.
+0.2
-0.0
-0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
+0.4
-0.2
+0.0
+0.0
complex community
Community=Kojac gum; Passage=4
N.D.
+0.0
+0.5
-0.3
+0.1
phage
phage_bap4
N.D.
+0.1
+0.3
-0.1
-0.0
complex community
Community=Locust bean gum; Passage=4
N.D.
-0.2
+0.5
+0.2
-0.2
phage
phage_bap4
N.D.
+0.1
+0.1
-0.2
+0.3
complex community
Community=guar; Passage=4
N.D.
-0.1
+0.3
+0.0
+0.3
no phage control
no phage control
N.D.
+0.1
+0.2
+0.0
+0.2
complex community
Community=Locust bean gum; Passage=4
N.D.
-0.0
+0.7
-0.1
+0.1
complex community
Community=arabino-guar; Passage=4
N.D.
+0.5
+0.6
-0.2
-0.2
no phage control
no phage control
N.D.
+0.2
+0.2
+0.1
+0.2
complex community
Community=arabino-guar; Passage=4
N.D.
+0.2
-0.3
+0.4
+0.4
complex community
Community=guar; Passage=4
N.D.
+0.4
+0.2
+0.2
-0.0
complex community
Community=Locust bean gum; Passage=4
N.D.
+0.1
+0.3
+0.2
+0.2
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