Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_06980	PS417_06985	PS417_06990	PS417_06995	PS417_07000
phage	JP1 MOI 1	+0.1	+0.6	-0.5	-0.7	-2.3
solid stress	Fraxetin 3 mM; solid stress	-1.0	+0.3	-0.0	+0.2	-1.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	-0.4	-0.1	-0.4	-0.7
seeds	Growth on radish seeds for 72 hours	-0.2	+0.4	+0.2	-0.3	-1.4
carbon source	L-Leucine (C)	-0.5	+0.4	-0.1	-0.2	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.5	-0.3	+0.0	-0.9
carbon source	L-Valine (C)	-0.5	+0.7	-0.1	-0.1	-0.4
phage	P. simiae ORA MOI 10	+0.6	+0.2	-0.2	+0.2	-1.3
phage	P. simiae Grant Run MOI 0.1	+0.1	+0.6	-0.2	-0.5	-0.5
carbon source	L-Histidine (C)	-0.2	+0.3	-0.0	+0.3	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.5	+0.7	-0.1	+0.5	-0.9
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.2	-0.3	+0.1	+0.5	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.2	+0.2	+0.5	-0.8
carbon source	Fumarate (C)	-0.4	+0.3	+0.0	+0.4	-0.5
carbon source	D-Alanine (C)	-0.1	+0.6	+0.1	+0.1	-0.7
carbon source	D-Glucose-6-Phosphate (C)	-0.2	+0.3	+0.2	+0.4	-0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+0.1	-0.0	+0.9	-0.6
stress	Gentamicin 0.008 mg/ml	+1.0	-0.0	+0.2	-0.6	-0.3
stress	methylglyoxal 0.032 vol%	+0.3	+0.7	+0.2	-0.9	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.2	-0.1	+0.5	-0.3	+0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.2	-0.4	+0.1	+0.7	+0.6
carbon source	2'-Deoxyinosine 5 mM (C)	+0.5	+0.7	+0.3	-0.1	-0.5
phage	P. simiae OR1 MOI 0.1	-0.7	+0.5	+0.2	+0.6	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.0	-0.4	+0.1	+1.4	-0.2
phage	JP1 MOI 1	-0.2	+0.7	+0.0	-0.3	+0.9
soil	soil sample 5; outgrowth in LB	-0.1	+0.5	+0.1	+0.4	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	-0.2	-0.1	+0.5	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2	-0.1	+0.2	+0.4	-0.0
soil	soil sample 7; outgrowth in LB	+0.4	+0.6	+0.0	+0.1	+0.7
phage	JP1 MOI 10	+0.3	+0.1	+0.2	-0.3	+1.5