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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 16 experiments (either direction), sorted by average fitness
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500 nt
GFF1371 and GFF1372 overlap by 4 nucleotides
GFF1372 and GFF1373 are separated by 13 nucleotides
GFF1373 and GFF1374 are separated by 28 nucleotides
GFF1374 and GFF1375 are separated by 69 nucleotides
GFF1371 - CaiB/BaiF family protein, at 1,394,309 to 1,395,517
GFF1371
GFF1372 - COGs COG3777, at 1,395,514 to 1,396,338
GFF1372
GFF1373 - Acyl-CoA dehydrogenase, at 1,396,352 to 1,397,506
GFF1373
GFF1374 - Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 1,397,535 to 1,398,734
GFF1374
GFF1375 - hypothetical protein, at 1,398,804 to 1,399,700
GFF1375
Group
Condition
GFF1371
GFF1372
GFF1373
GFF1374
GFF1375
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
-0.4
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.1
+0.1
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.0
-0.4
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
+0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.0
+0.1
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.4
+0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
-0.0
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.1
-0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
+0.2
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
-0.0
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.0
+0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.2
+0.3
-0.0
-0.0
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