Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_06930	PS417_06935	PS417_06940	PS417_06945	PS417_06950
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.2	-0.2	-3.9	+0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5	-0.1	+0.3	-3.5	+0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.0	-0.2	+0.1	-3.5	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.3	+0.0	-2.7	-0.4
motility	outer cut, LB soft agar motility assay	-0.3	-0.1	+0.0	-1.8	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.1	-0.1	-2.4	+0.1
soil	soil sample 4; outgrowth in LB	-0.3	+0.4	-0.1	-2.2	-0.2
soil	soil sample 8; outgrowth in LB	-0.5	-0.1	-0.1	-1.6	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.0	+0.4	+0.0	-2.9	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.2	-0.2	-0.3	-1.3	-0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.5	+0.3	-2.4	+0.5
phage	P. simiae OR Antrim MOI 10	-0.0	-0.4	+0.0	-1.7	+0.2
stress	Phosphomycin 0.002 mg/ml	-0.5	+0.1	+0.1	-1.3	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+0.5	-0.4	-1.0	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3	+0.3	-0.1	-1.5	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	+0.1	+0.0	+0.2	-1.8	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	-0.1	-0.2	-1.3	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.4	+0.2	+0.1	-1.7	+0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	+0.1	-0.2	-1.3	-0.1
phage	JP1 MOI 1	-0.6	-0.3	-0.2	+1.1	-0.3
stress	methylglyoxal 0.032 vol%	-0.3	-0.6	-0.3	+1.4	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.6	+0.2	+1.6	-0.3
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.9	+0.5	+0.4	+0.9	-0.1
phage	JP1 MOI 10	-0.8	+0.5	+0.3	+1.3	-0.4
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.7	-0.3	-0.0	+1.3	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	+0.6	+0.4	+1.2	+0.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.4	+0.4	+0.1	+2.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.4	-0.1	+1.9	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.7	-0.2	+1.5	-0.1
stress	Gentamicin 0.008 mg/ml	+0.2	+0.1	+0.2	+2.2	+0.1