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Cofit
Protein
Homologs
Fitness for 5 genes in
Methylophilus sp. DMC18
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
GFF1349 and GFF1350 are separated by 30 nucleotides
GFF1350 and GFF1351 are separated by 12 nucleotides
GFF1351 and GFF1352 are separated by 90 nucleotides
GFF1352 and GFF1353 are separated by 174 nucleotides
GFF1349 - Phosphate regulon transcriptional regulatory protein PhoB, at 614,025 to 614,393
GFF1349
GFF1350 - hypothetical protein, at 614,424 to 616,838
GFF1350
GFF1351 - Chemotaxis protein CheW, at 616,851 to 617,366
GFF1351
GFF1352 - hypothetical protein, at 617,457 to 620,066
GFF1352
GFF1353 - hypothetical protein, at 620,241 to 622,745
GFF1353
Group
Condition
GFF1349
GFF1350
GFF1351
GFF1352
GFF1353
carbon source
Methanol and casaminos (C)
-0.5
-0.3
-0.2
-0.2
-0.2
carbon source
D-Glucose and casaminos (C)
-0.1
-0.7
-0.1
+0.0
-0.0
carbon source
D-Glucose and casaminos (C)
+0.2
-0.9
-0.1
+0.1
-0.1
carbon source
D-Glucose and casaminos (C)
+0.4
-0.9
-0.1
+0.0
-0.0
carbon source
Methanol (C)
+0.1
-0.1
-0.2
-0.0
+0.0
carbon source
D-Glucose and Methanol (C)
-0.3
+0.0
+0.1
-0.0
-0.0
carbon source
D-Glucose (C)
+0.2
-0.5
+0.0
+0.1
+0.0
carbon source
Methanol and casaminos (C)
+0.3
-0.3
+0.1
-0.1
+0.0
carbon source
Methanol and casaminos (C)
+0.2
-0.0
-0.1
-0.1
+0.1
carbon source
dNMS no carbon
+0.1
-0.2
+0.2
+0.1
-0.0
supernatant
Supernatant; Methylosinus sp. DMC45 grown in dNMS with methane 1x
+0.4
+0.0
-0.3
-0.0
-0.0
carbon source
Methanol (C)
+0.1
-0.2
+0.3
-0.1
+0.0
carbon source
D-Glucose (C)
+0.6
-0.4
-0.1
+0.0
-0.0
carbon source
Methanol (C)
+0.7
-0.3
-0.1
+0.0
-0.1
supernatant
Supernatant; Methylosinus sp. DMC45 grown in dNMS with methane 1x
+0.5
-0.3
+0.3
-0.0
-0.2
carbon source
D-Glucose and Methanol (C)
+0.3
-0.1
+0.1
+0.0
+0.0
carbon source
D-Glucose (C)
+0.5
-0.1
+0.0
+0.1
+0.0
carbon source
dNMS no carbon
+0.5
-0.1
-0.0
+0.1
+0.1
supernatant
Supernatant; Methylosinus sp. DMC45 grown in dNMS with methane 0.5x
+0.5
-0.2
+0.1
+0.1
+0.1
carbon source
dNMS no carbon
+0.4
+0.1
-0.0
+0.1
+0.1
supernatant
Supernatant; Methylosinus sp. DMC45 grown in dNMS with methane 0.5x
+0.8
-0.0
+0.2
+0.1
-0.0
carbon source
D-Glucose and Methanol (C)
+0.7
-0.1
+0.3
+0.1
+0.2
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