Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1344 and GFF1345 are separated by 139 nucleotidesGFF1345 and GFF1346 overlap by 1 nucleotidesGFF1346 and GFF1347 are separated by 15 nucleotidesGFF1347 and GFF1348 are separated by 28 nucleotides GFF1344 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 687,509 to 688,684 GFF1344 GFF1345 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 688,824 to 690,677 GFF1345 GFF1346 - hypothetical protein, at 690,677 to 690,928 GFF1346 GFF1347 - Dabb, at 690,944 to 691,246 GFF1347 GFF1348 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 691,275 to 692,072 GFF1348
Group Condition GFF1344 GFF1345 GFF1346 GFF1347 GFF1348
complex community Community=guar; Passage=4 -0.1 +0.0 -2.2 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 +0.5 -1.0 -1.0 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 -0.3 -1.2 +0.6 -0.2
complex community Community=guar; Passage=4 -0.1 +0.1 -1.1 +0.3 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.3 -0.3 -0.3
complex community Community=guar; Passage=4 -0.1 -0.1 -0.4 -0.2 +0.0
complex community Community=Locust bean gum; Passage=4 -0.6 -0.1 -0.5 -0.1 +0.4
complex community Community=Kojac gum; Passage=4 -0.3 +0.1 -0.4 -0.5 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.5 -1.0 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.1 -0.3 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 -0.1 -0.5 +0.2
complex community Community=guar; Passage=4 -0.2 +0.2 -0.5 -0.5 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 -0.1 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.2 -0.1 -0.6 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 -0.4 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.0 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.3 -0.2 +0.6 -0.2
phage phage_bap4 +0.1 -0.1 +0.3 -0.5 +0.2
complex community Community=arabino-guar; Passage=4 -0.8 +0.0 +0.2 +0.3 +0.3
complex community Community=arabino-guar; Passage=4 +0.0 +0.5 -0.4 +0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.0 +0.1 +0.6 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 +0.1 +0.4 +0.1
phage phage_bap4 -0.1 -0.2 +0.2 +0.5 -0.0
complex community Community=Locust bean gum; Passage=1 +0.1 +0.1 +0.1 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.0 +0.3 +0.5 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 -0.1 +0.3 +0.5 +0.3
phage phage_bap4 -0.2 +0.1 +0.4 +0.2 +0.0
phage phage_bap4 -0.1 +0.0 +0.2 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.2 +0.3 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.8 -0.4 +0.7 +0.3
remove
GFF1344
plot		 remove
GFF1345
plot		 remove
GFF1346		 remove
GFF1347
plot		 remove
GFF1348
plot