Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1343 and GFF1344 are separated by 46 nucleotidesGFF1344 and GFF1345 are separated by 139 nucleotidesGFF1345 and GFF1346 overlap by 1 nucleotidesGFF1346 and GFF1347 are separated by 15 nucleotides GFF1343 - macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides, at 685,987 to 687,462 GFF1343 GFF1344 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 687,509 to 688,684 GFF1344 GFF1345 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 688,824 to 690,677 GFF1345 GFF1346 - hypothetical protein, at 690,677 to 690,928 GFF1346 GFF1347 - Dabb, at 690,944 to 691,246 GFF1347
Group Condition GFF1343 GFF1344 GFF1345 GFF1346 GFF1347
complex community Community=guar; Passage=4 -0.6 -0.1 +0.0 -2.2 +0.2
complex community Community=Locust bean gum; Passage=4 +0.5 -0.5 +0.5 -1.0 -1.0
complex community Community=Kojac gum; Passage=4 -0.3 -0.3 +0.1 -0.4 -0.5
complex community Community=arabino-guar; Passage=4 -0.1 -0.4 -0.3 -1.2 +0.6
complex community Community=Locust bean gum; Passage=4 -0.0 -0.6 -0.1 -0.5 -0.1
complex community Community=guar; Passage=4 +0.1 -0.2 +0.2 -0.5 -0.5
complex community Community=guar; Passage=4 +0.0 -0.1 -0.1 -0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.1 -0.1 -0.1 -0.5
complex community Community=arabino-guar; Passage=4 -0.3 -0.8 +0.0 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 +0.1 -0.3 -0.3
complex community Community=guar; Passage=4 +0.3 -0.1 +0.1 -1.1 +0.3
complex community Community=arabino-guar; Passage=4 -0.7 -0.4 -0.1 +0.3 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.2 -0.1 -0.6
phage phage_bap4 -0.0 +0.1 -0.1 +0.3 -0.5
phage phage_bap4 -0.5 -0.1 -0.2 +0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 -0.3 -0.2 +0.6
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 +0.1 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 -0.1 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 -0.2 -0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +0.4 -0.2 +0.5 -1.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 -0.1 +0.1 +0.3
no phage control no phage control +0.1 -0.1 +0.2 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 -0.2 +0.0 +0.5 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.3 +0.0 +0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 -0.1 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 +0.0 +0.3 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.1 +0.0 -0.1 +0.4
phage phage_bap4 +0.0 -0.2 +0.1 +0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 +0.2 +0.2 +0.3
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 +0.8 -0.4 +0.7
remove
GFF1343
plot		 remove
GFF1344
plot		 remove
GFF1345		 remove
GFF1346
plot		 remove
GFF1347
plot