Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1338 and GFF1339 are separated by 4 nucleotidesGFF1339 and GFF1340 overlap by 4 nucleotidesGFF1340 and GFF1341 are separated by 1 nucleotidesGFF1341 and GFF1342 are separated by 150 nucleotides GFF1338 - ABC transporter, permease protein 1 RSc1751, at 679,949 to 680,902 GFF1338 GFF1339 - ABC transporter, permease protein 2 RSc1752, at 680,907 to 682,235 GFF1339 GFF1340 - ABC transporter, ATP-binding protein 1 RSc1753, at 682,232 to 683,002 GFF1340 GFF1341 - ABC transporter, ATP-binding protein 2 RSc1754, at 683,004 to 683,699 GFF1341 GFF1342 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 683,850 to 685,955 GFF1342
Group Condition GFF1338 GFF1339 GFF1340 GFF1341 GFF1342
complex community Community=arabino-guar; Passage=4 -1.2 -0.3 -0.7 +0.3 -0.5
complex community Community=guar; Passage=4 -0.8 -0.1 -0.6 -0.1 -0.2
complex community Community=guar; Passage=4 -0.7 -0.4 -0.1 -0.4 -0.3
complex community Community=Locust bean gum; Passage=4 -0.0 -0.4 -0.3 -0.7 -0.2
complex community Community=arabino-guar; Passage=4 -0.8 -0.1 -0.3 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 -0.8 -0.3 -0.5 +0.1 +0.0
complex community Community=guar; Passage=4 -0.6 +0.0 -1.0 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 -0.6 +0.0 -0.3 -0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.2 -0.3 +0.1 -0.4 -0.2
phage phage_bap4 -0.1 -0.1 -0.3 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.2 -0.0 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.4 -0.1 +0.2
complex community Community=guar; Passage=4 -0.2 -0.3 +0.1 +0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.2 -0.0 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 -0.2 -0.3 +0.1
phage phage_bap4 +0.3 -0.0 -0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.3 +0.0 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.1 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.3 -0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 -0.1 -0.2 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.2 -0.1 +0.4
complex community Community=Locust bean gum; Passage=4 -0.0 -0.3 +0.2 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 +0.3 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 +1.0 -0.6 -0.2 -0.2 -0.0
phage phage_bap4 +0.3 +0.0 -0.2 -0.1 +0.1
phage phage_bap4 +0.3 +0.1 -0.2 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 -0.1 -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.0 +0.2 -0.1 +0.1
complex community Community=Locust bean gum; Passage=1 -0.1 +0.0 +0.3 +0.2 +0.1
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