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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1335 and GFF1336 are separated by 142 nucleotides
GFF1336 and GFF1337 are separated by 218 nucleotides
GFF1337 and GFF1338 are separated by 80 nucleotides
GFF1338 and GFF1339 are separated by 4 nucleotides
GFF1335 - 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type, at 675,402 to 677,045
GFF1335
GFF1336 - ABC transporter, substrate-binding protein RSc1750, at 677,188 to 678,417
GFF1336
GFF1337 - ABC transporter, substrate-binding protein RSc1750, at 678,636 to 679,868
GFF1337
GFF1338 - ABC transporter, permease protein 1 RSc1751, at 679,949 to 680,902
GFF1338
GFF1339 - ABC transporter, permease protein 2 RSc1752, at 680,907 to 682,235
GFF1339
Group
Condition
GFF1335
GFF1336
GFF1337
GFF1338
GFF1339
complex community
Community=arabino-guar; Passage=4
-0.1
+0.2
-0.2
-1.2
-0.3
complex community
Community=guar; Passage=4
-0.1
-0.2
-0.0
-0.7
-0.4
complex community
Community=guar; Passage=4
-0.2
+0.1
-0.1
-0.8
-0.1
complex community
Community=Kojac gum; Passage=4
-0.1
-0.1
+0.2
-0.8
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.3
+0.1
-0.4
-0.0
-0.4
complex community
Community=arabino-guar; Passage=4
-0.0
+0.0
-0.1
-0.8
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.1
-0.3
-0.0
-0.3
complex community
Community=guar; Passage=4
+0.1
+0.1
-0.3
-0.2
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.1
-0.1
-0.2
-0.3
complex community
Community=guar; Passage=4
-0.2
+0.2
-0.0
-0.6
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.2
+0.2
-0.3
-0.6
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.1
-0.0
-0.2
-0.2
complex community
Community=arabino-guar; Passage=4
-0.2
+0.1
-0.0
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.2
-0.0
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
+0.1
-0.0
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
+0.1
-0.1
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
+0.3
-0.1
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
+0.1
-0.2
+0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.1
-0.3
+0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
+0.2
+0.1
-0.3
-0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
+0.1
-0.1
+0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.1
-0.1
+0.5
-0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.2
+0.1
+0.1
+0.4
-0.0
phage
phage_bap4
+0.0
-0.1
+0.1
+0.3
+0.0
complex community
Community=arabino-guar; Passage=4
-0.0
+0.2
-0.3
+1.0
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.2
-0.1
+0.4
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.1
+0.1
+0.3
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
+0.0
+0.1
+0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
+0.2
-0.0
+0.3
-0.0
phage
phage_bap4
+0.1
+0.0
+0.1
+0.3
+0.1
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