Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1329 and GFF1330 overlap by 4 nucleotidesGFF1330 and GFF1331 are separated by 60 nucleotidesGFF1331 and GFF1332 are separated by 14 nucleotidesGFF1332 and GFF1333 are separated by 3 nucleotides GFF1329 - Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12), at 668,338 to 668,754 GFF1329 GFF1330 - UPF0061 protein YdiU, at 668,751 to 670,232 GFF1330 GFF1331 - Transcriptional regulator, AraC family, at 670,293 to 671,372 GFF1331 GFF1332 - no description, at 671,387 to 671,518 GFF1332 GFF1333 - para-nitrobenzyl esterase (intracellular esterase B), at 671,522 to 673,354 GFF1333
Group Condition GFF1329 GFF1330 GFF1331 GFF1332 GFF1333
complex community Community=Locust bean gum; Passage=4 -0.4 -0.3 +0.4 -3.5 +0.1
complex community Community=Kojac gum; Passage=4 +0.1 -0.0 +0.2 -2.6 -0.3
complex community Community=Locust bean gum; Passage=4 -1.4 -0.1 +0.1 -0.3 +0.3
complex community Community=arabino-guar; Passage=4 -0.8 +0.1 -0.2 +0.4 +0.2
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 +0.6 -0.8 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.3 +0.4 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.2 +0.1 +0.4 +0.1
complex community Community=guar; Passage=4 -0.2 +0.5 -0.0 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 +0.1 +0.5 -0.1
complex community Community=arabino-guar; Passage=4 -0.3 -0.1 +0.2 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 +0.1 +0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.0 +0.1 +0.5 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 +0.1 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 +0.1 +0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 +0.0 +0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 +0.0 +0.6 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.0 -0.1 +0.7 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 +0.1 +0.5 +0.1
complex community Community=guar; Passage=4 +0.4 +0.0 -0.2 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 +0.1 +0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.1 +0.0 +0.6 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 +0.0 +0.8 +0.1
complex community Community=arabino-guar; Passage=4 -0.5 +0.2 +0.4 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.1 +0.2 +0.7 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.1 +0.1 +0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.0 +0.2 +0.7 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 -0.1 +0.9 +0.0
complex community Community=arabino-guar; Passage=4 -0.1 +0.4 +0.3 +0.1 +0.2
complex community Community=guar; Passage=4 +0.0 -0.4 +0.1 +0.9 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.0 +0.2 +0.9 +0.0
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