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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1324 and GFF1325 are separated by 5 nucleotides
GFF1325 and GFF1326 are separated by 63 nucleotides
GFF1326 and GFF1327 are separated by 139 nucleotides
GFF1327 and GFF1328 overlap by 4 nucleotides
GFF1324 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3), at 662,221 to 666,189
GFF1324
GFF1325 - no description, at 666,195 to 666,506
GFF1325
GFF1326 - Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8), at 666,570 to 667,355
GFF1326
GFF1327 - Cell division protein BolA, at 667,495 to 667,788
GFF1327
GFF1328 - Intracellular septation protein IspA, at 667,785 to 668,327
GFF1328
Group
Condition
GFF1324
GFF1325
GFF1326
GFF1327
GFF1328
complex community
Community=arabino-guar; Passage=4
-5.1
+0.5
-0.8
-0.3
N.D.
complex community
Community=arabino-guar; Passage=4
-5.3
+0.8
-0.9
-0.3
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.9
-0.5
-0.5
+0.3
N.D.
complex community
Community=arabino-guar; Passage=4
-5.0
-0.2
-0.2
-0.2
N.D.
complex community
Community=Kojac gum; Passage=4
-4.8
-0.6
-0.2
+0.0
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.6
+0.1
-0.7
+0.1
N.D.
complex community
Community=guar; Passage=4
-5.2
-0.1
-0.2
+0.4
N.D.
complex community
Community=guar; Passage=4
-4.8
-0.3
-0.0
+0.1
N.D.
complex community
Community=guar; Passage=4
-5.2
+0.1
+0.1
-0.0
N.D.
complex community
Community=Locust bean gum; Passage=4
-4.1
+0.2
-0.8
-0.3
N.D.
complex community
Community=guar; Passage=4
-4.9
+0.1
-0.2
+0.1
N.D.
complex community
Community=arabino-guar; Passage=4
-5.0
+0.7
+0.2
+0.0
N.D.
complex community
Community=Locust bean gum; Passage=4
-2.8
-0.2
-0.5
+0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-2.5
+0.1
-0.3
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-2.4
+0.3
-0.1
-0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-2.5
+0.1
+0.1
+0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-2.0
-0.4
+0.0
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-2.4
+0.2
-0.1
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.2
+0.1
-0.2
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-2.5
+0.2
-0.1
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.3
+0.1
+0.1
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-2.5
+0.2
-0.1
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.3
+0.0
-0.1
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.3
-0.1
-0.0
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.2
+0.2
-0.0
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.2
-0.0
-0.1
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-1.9
+0.3
-0.2
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-2.1
+0.2
-0.1
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-2.3
+0.2
+0.1
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.0
+0.1
-0.1
+0.3
N.D.
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