Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_06665	PS417_06675	PS417_06680	PS417_06685	PS417_06690
phage	Wcs_1	-0.8	-1.4	-2.0	-2.9	-0.5
solid stress	Fraxetin 2 mM; solid stress	+0.1	-0.4	-2.5	-4.0	+0.0
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.5	-0.9	-2.0	-3.2	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	-1.8	-4.5	-0.9	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	-0.4	-2.0	-3.9	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	+0.2	-1.8	-4.4	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-1.7	-3.2	-1.0	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.1	-0.5	-4.0	-0.5	-0.2
solid stress	80% Methanol 0.5 mM; solid stress	-0.1	+0.1	-2.2	-3.0	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	-0.2	-3.8	-1.2	+0.0
liquid stress	Scopoletin 3 mM; liquid stress	-0.1	-0.6	-3.1	-1.2	+0.0
solid stress	Scopoletin 3 mM; solid stress	-0.2	+0.3	-3.7	-1.2	-0.0
carbon source	2-Deoxy-D-Ribose (C)	-0.2	+0.2	-0.3	-4.4	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.1	-3.2	-1.7	+0.5
solid stress	Fraxetin 1 mM; solid stress	-0.1	+0.2	-2.8	-1.8	-0.1
solid stress	Scopoletin 3 mM; solid stress	-0.2	+0.2	-3.6	-0.7	-0.3
solid stress	Fraxetin 2 mM; solid stress	-0.3	+0.5	-3.2	-1.3	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.1	+0.0	+0.3	-4.4	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	-1.4	-2.6	+0.7	+0.3
seeds	Growth on radish seeds for 72 hours	-0.2	+1.2	-1.0	-2.6	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.2	-3.9	+1.0	-0.0
nitrogen source	Adenine (N)	-0.4	-0.5	+4.0	-4.7	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.1	-1.0	-2.3	+1.6	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.7	-3.1	+1.7	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.4	-2.6	+1.7	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.0	-1.7	-0.7	+2.8	-0.1
phage	JP1 MOI 0.1	+0.7	-1.2	+1.9	-1.0	+0.5
stress	Phosphomycin 0.002 mg/ml	+0.2	+0.4	+4.4	-0.4	+0.0
stress	Phosphomycin 0.001 mg/ml	+0.2	-0.2	+5.0	+0.3	+0.1
stress	Phosphomycin 0.003 mg/ml	+0.3	+0.3	+4.7	+0.3	-0.0