Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_00055	PS417_00060	PS417_00065	PS417_00070	PS417_00075
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-1.0	N.D.	-2.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-1.7	N.D.	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-2.0	N.D.	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-1.1	N.D.	-1.6
phage	JP1 MOI 10	N.D.	N.D.	-2.7	N.D.	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-1.2	N.D.	-1.1
stress	Thallium(I) acetate 0.0625 mg/ml	N.D.	N.D.	-0.2	N.D.	-2.0
phage	P. simiae Grant Run MOI 10	N.D.	N.D.	-1.5	N.D.	-0.6
seeds	Growth on radish seeds for 24 hours	N.D.	N.D.	-1.2	N.D.	-0.9
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	N.D.	N.D.	-2.0	N.D.	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-1.3	N.D.	-0.6
phage	JP1 MOI 0.1	N.D.	N.D.	-0.9	N.D.	-1.0
phage	P. simiae OR Antrim MOI 10	N.D.	N.D.	-1.5	N.D.	-0.4
stress	Doxycycline hyclate 0.001 mg/ml	N.D.	N.D.	-1.2	N.D.	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	N.D.	-1.6	N.D.	-0.1
stress	Paraquat dichloride 0.002 mg/ml	N.D.	N.D.	-0.1	N.D.	-1.5
nophagecontrol	Only library	N.D.	N.D.	-0.6	N.D.	-1.0
stress	Choline Lysine 25 mM	N.D.	N.D.	-1.1	N.D.	-0.6
phage	P. simiae OR Antrim MOI 1	N.D.	N.D.	-0.4	N.D.	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-0.8	N.D.	-0.8
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	N.D.	N.D.	-2.1	N.D.	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	+0.6	N.D.	-1.6
carbon source	a-Ketoglutaric (C)	N.D.	N.D.	-1.2	N.D.	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	-1.3	N.D.	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	+1.1	N.D.	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-0.8	N.D.	+1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	N.D.	+1.7	N.D.	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	N.D.	+1.3	N.D.	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	N.D.	N.D.	+1.1	N.D.	+0.6
carbon source	L-Valine (C)	N.D.	N.D.	+1.6	N.D.	+1.1