Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1287 and GFF1288 are separated by 0 nucleotidesGFF1288 and GFF1289 are separated by 1 nucleotidesGFF1289 and GFF1290 are separated by 19 nucleotidesGFF1290 and GFF1291 overlap by 4 nucleotides GFF1287 - Sulfate and thiosulfate binding protein CysP, at 614,293 to 615,309 GFF1287 GFF1288 - Sulfate transport system permease protein CysT, at 615,310 to 616,197 GFF1288 GFF1289 - Sulfate transport system permease protein CysW, at 616,199 to 617,101 GFF1289 GFF1290 - Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25), at 617,121 to 618,218 GFF1290 GFF1291 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 618,215 to 618,718 GFF1291
Group Condition GFF1287 GFF1288 GFF1289 GFF1290 GFF1291
complex community Community=Locust bean gum; Passage=4 -1.1 -1.2 -1.2 -1.3 N.D.
complex community Community=Locust bean gum; Passage=4 -1.0 -0.9 -1.0 -0.6 N.D.
complex community Community=guar; Passage=4 -0.8 -0.4 -0.5 -0.7 N.D.
complex community Community=arabino-guar; Passage=4 -0.5 -0.6 -0.3 -1.0 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 -0.9 -0.5 -0.3 N.D.
complex community Community=guar; Passage=4 -0.5 -0.2 -0.7 -0.8 N.D.
complex community Community=guar; Passage=4 -0.6 -0.6 -0.5 -0.5 N.D.
complex community Community=Locust bean gum; Passage=4 -0.4 -0.6 -0.5 -0.6 N.D.
complex community Community=arabino-guar; Passage=4 -0.7 -0.1 -0.9 -0.3 N.D.
complex community Community=Kojac gum; Passage=4 -1.0 -0.1 -0.5 -0.4 N.D.
complex community Community=guar; Passage=4 -0.6 -0.6 -0.5 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 -0.6 -0.2 -0.4 N.D.
complex community Community=Locust bean gum; Passage=4 -0.2 -0.2 -0.3 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.4 +0.1 -0.1 N.D.
phage phage_bap4 +0.1 +0.5 +0.2 +0.0 N.D.
phage phage_bap4 +0.1 +0.3 +0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 +0.4 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.2 +0.3 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.5 +0.0 +0.3 N.D.
complex community Community=Locust bean gum; Passage=1 +0.2 +0.2 +0.2 +0.4 N.D.
no phage control no phage control +0.2 +0.3 +0.4 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.5 +0.1 N.D.
no phage control no phage control +0.2 +0.2 +0.3 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.1 +0.3 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.2 +0.1 +0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.3 +0.5 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.6 +0.4 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.4 +0.5 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.4 +0.5 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.2 +0.3 +0.6 N.D.
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