Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06510	PS417_06515	PS417_06525	PS417_06530	PS417_06535
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.2	-0.8	-4.5	N.D.
soil	soil sample 6; outgrowth in LB	-0.1	-0.0	-0.2	-5.1	N.D.
soil	soil sample 3; outgrowth in LB	-0.4	-0.2	+0.1	-4.8	N.D.
soil	soil sample 4; outgrowth in LB	+0.2	-0.2	-0.3	-3.9	N.D.
stress	methylglyoxal 0.032 vol%	-4.0	-0.1	+0.1	-0.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.1	-0.7	-3.1	N.D.
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.4	-0.2	-0.4	-2.7	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.2	+0.0	-0.6	-2.8	N.D.
soil	soil sample 5; outgrowth in LB	-0.1	-0.2	-0.0	-3.2	N.D.
supernatant control	Vogels_fungal_media 0.1X	+0.1	+0.0	-1.0	-2.7	N.D.
stress	L-Lysine 60 mM	-0.3	-0.2	-0.0	-2.9	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.1	-0.0	-3.2	N.D.
root	root sample 6; outgrowth in LB	-0.3	-0.5	-0.1	-2.5	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.2	+0.0	-0.5	-3.0	N.D.
stress	Cisplatin 0.01 mg/ml	-3.0	+0.2	+0.1	-0.6	N.D.
stress	Neomycin 0.04 mg/ml	-0.3	+0.3	-0.4	-2.7	N.D.
motility	inner cut, LB soft agar motility assay	-0.7	-0.9	-0.2	-1.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	+0.1	-0.4	-2.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.0	+0.0	-2.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	-0.4	-0.3	-2.6	N.D.
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.2	-0.3	-0.1	-2.3	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	+0.1	-0.3	-2.8	N.D.
stress	Polymyxin B sulfate 0.006 mg/ml	+0.2	+0.2	-0.4	-2.7	N.D.
stress	R2A with Fusaric 120 ug/mL	+0.0	+0.1	-0.2	-2.6	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.1	-0.9	-2.0	N.D.
solid stress	Fraxetin 3 mM; solid stress	-0.1	+0.5	-0.2	-2.8	N.D.
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.3	-0.1	+0.1	-2.7	N.D.
solid stress	Fraxetin 3 mM; solid stress	+0.7	+0.8	-0.2	-3.4	N.D.
solid stress	Fraxetin 2 mM; solid stress	+0.2	+0.4	-0.3	-2.4	N.D.
stress	Nalidixic 0.015 mg/ml	+1.3	+0.1	-0.1	-1.3	N.D.