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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 16 experiments (either direction), sorted by average fitness
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500 nt
GFF1269 and GFF1270 are separated by 188 nucleotides
GFF1270 and GFF1271 are separated by 39 nucleotides
GFF1271 and GFF1272 are separated by 4 nucleotides
GFF1272 and GFF1273 overlap by 4 nucleotides
GFF1269 - Serine acetyltransferase (EC 2.3.1.30), at 1,298,525 to 1,299,241
GFF1269
GFF1270 - hypothetical protein, at 1,299,430 to 1,300,203
GFF1270
GFF1271 - Hydrogen peroxide-inducible genes activator => OxyR, at 1,300,243 to 1,301,172
GFF1271
GFF1272 - Molybdopterin synthase catalytic subunit MoaE (EC 2.8.1.12), at 1,301,177 to 1,301,620
GFF1272
GFF1273 - Molybdopterin synthase sulfur carrier subunit, at 1,301,617 to 1,301,877
GFF1273
Group
Condition
GFF1269
GFF1270
GFF1271
GFF1272
GFF1273
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.2
-0.3
+0.0
-0.1
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.0
+0.1
-0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.8
-0.4
-0.1
-0.5
+1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.1
-0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
+0.1
+0.1
-0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
-0.0
-0.1
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
-0.1
-0.7
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.2
+0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.1
-0.0
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
-0.2
-0.0
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
+0.2
+0.1
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.0
-0.1
+0.1
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.0
+0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
-0.2
-0.0
-0.2
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.1
+0.2
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
-0.1
+0.3
+0.3
+0.7
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