Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_06400	PS417_06405	PS417_06410	PS417_06415	PS417_06420
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	-1.0	-0.8	-0.7	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5	-0.9	-0.5	-0.7	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	-0.9	-0.8	-0.9	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	-0.9	+0.0	-0.2	+0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.3	-0.5	-0.5	+0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.7	-0.2	-0.3	-0.4	+0.1
soil	soil sample 5; outgrowth in LB	-1.6	-0.3	+0.2	+0.3	+0.1
phage	JP1 MOI 1	-1.1	-0.1	-0.3	+0.2	+0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.6	-0.4	+0.2	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.3	+0.3	-0.6	-0.4
supernatant control	Vogels_fungal_media 0.1X	-0.7	+0.0	-0.4	-0.3	+0.4
motility	inner cut, LB soft agar motility assay	-0.6	-0.2	+0.2	-0.5	+0.3
phage	P. simiae ORA MOI 1	-1.0	-0.1	+0.1	+0.4	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	+0.0	-0.3	-0.2	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	+0.2	-0.5	-0.4	+0.3
phage	P. simiae Grant Run MOI 10	+1.0	-0.6	-0.6	+0.2	-0.5
seeds	Growth on radish seeds for 72 hours	+0.5	-0.6	-0.2	-0.5	+0.5
carbon source	2'-Deoxyinosine 5 mM (C)	+0.4	-0.4	+0.2	-0.3	-0.3
nophagecontrol	Only library	-0.9	+0.0	-0.1	+0.6	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9	-0.0	-0.2	-0.7	+0.0
seeds	Growth on radish seeds for 72 hours	-0.2	-0.3	-0.3	+0.2	+0.5
liquid stress	80% Methanol 3 mM; liquid stress	+0.3	+0.3	-0.4	+0.2	-0.3
phage	P. simiae Grant Run MOI 0.1	+0.8	+0.2	-0.2	+0.1	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8	+0.2	-0.2	-0.1	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9	+0.2	+0.1	-0.5	+0.1
stress	Doxycycline hyclate 0.001 mg/ml	+0.9	-0.0	-0.1	-0.3	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	+0.5	+1.1	-0.5	-0.4
phage	P. simiae ORA MOI 0.1	+0.5	-0.1	+0.5	-0.2	+0.3
agar plate interaction control	Taped volatile agar plate with no fungus	+0.8	+0.3	+0.4	+0.1	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.0	+0.3	+0.2	+0.2	+0.3