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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1255 and GFF1256 overlap by 4 nucleotides
GFF1256 and GFF1257 overlap by 4 nucleotides
GFF1257 and GFF1258 overlap by 8 nucleotides
GFF1258 and GFF1259 are separated by 3 nucleotides
GFF1255 - Chain length determinant exopolysaccharide biosynthesis protein EpsF, at 1,283,346 to 1,284,701
GFF1255
GFF1256 - Tyrosine-protein kinase EpsD (EC 2.7.10.2), at 1,284,698 to 1,285,603
GFF1256
GFF1257 - N-acetylmannosaminyltransferase (EC 2.4.1.187), at 1,285,600 to 1,286,406
GFF1257
GFF1258 - Putative transmembrane protein, at 1,286,399 to 1,287,673
GFF1258
GFF1259 - EXOPOLYSACCHARIDE PRODUCTION PROTEIN EXOQ, at 1,287,677 to 1,289,059
GFF1259
Group
Condition
GFF1255
GFF1256
GFF1257
GFF1258
GFF1259
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.0
-0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.2
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.0
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.2
-0.0
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
+0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.2
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.0
+0.0
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