Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_06355	PS417_06360	PS417_06365	PS417_06370	PS417_06375
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.5	N.D.	+0.0	-2.8	-4.4
solid stress	Fraxetin 3 mM; solid stress	-1.3	N.D.	-3.9	-2.1	-1.3
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.7	N.D.	-1.4	-1.1	-4.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	N.D.	+0.5	-3.3	-4.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	N.D.	+0.0	-1.0	-4.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6	N.D.	-0.0	-2.3	-4.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	N.D.	+0.3	-2.4	-4.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4	N.D.	+0.4	-1.6	-4.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2	N.D.	+0.1	-1.4	-4.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.8	N.D.	+0.6	-0.5	-4.1
stress	R2A with Fusaric 120 ug/mL	-0.9	N.D.	+0.9	-1.9	-3.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8	N.D.	+1.6	-1.9	-3.8
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.4	N.D.	+1.3	-1.1	-4.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	N.D.	+0.7	+0.7	-4.0
stress	Gentamicin 0.008 mg/ml	+1.5	N.D.	-0.1	-1.3	-4.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.2	N.D.	+1.8	-0.2	-4.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	N.D.	+3.5	-2.0	-4.0
soil	soil sample 2; outgrowth in LB	+0.1	N.D.	+6.1	-0.9	-3.6
soil	soil sample 3; outgrowth in LB	-0.1	N.D.	+7.2	-1.8	-3.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+4.2	N.D.	+0.4	+0.8	-1.8
soil	soil sample 8; outgrowth in LB	-0.1	N.D.	+7.4	-0.0	-3.6
soil	soil sample 6; outgrowth in LB	+0.3	N.D.	+7.6	+0.2	-3.6
soil	soil sample 7; outgrowth in LB	-0.1	N.D.	+7.4	+1.0	-3.7
soil	soil sample 4; outgrowth in LB	+0.4	N.D.	+7.6	+0.6	-3.4
soil	soil sample 5; outgrowth in LB	+0.6	N.D.	+8.3	+0.6	-3.5
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7	N.D.	+6.9	+0.0	+0.2
root	root sample 6; outgrowth in LB	+0.4	N.D.	+10.6	-1.1	-2.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.4	N.D.	+10.0	+0.4	-2.6
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.6	N.D.	+9.8	+0.2	-2.9
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.6	N.D.	+9.8	+0.2	-2.7