Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1221 and GFF1222 are separated by 9 nucleotidesGFF1222 and GFF1223 are separated by 192 nucleotidesGFF1223 and GFF1224 are separated by 15 nucleotidesGFF1224 and GFF1225 are separated by 149 nucleotides GFF1221 - KEGG: putative acetyltransferase , at 541,069 to 541,521 GFF1221 GFF1222 - Methylglyoxal synthase (EC 4.2.3.3), at 541,531 to 542,454 GFF1222 GFF1223 - Aldo/keto reductase, SMc04056 family, at 542,647 to 543,675 GFF1223 GFF1224 - Transcriptional regulator, LysR family, at 543,691 to 544,584 GFF1224 GFF1225 - Glycine/D-amino acid oxidases (deaminating), at 544,734 to 545,906 GFF1225
Group Condition GFF1221 GFF1222 GFF1223 GFF1224 GFF1225
complex community Community=Locust bean gum; Passage=4 -0.4 -0.7 -0.3 -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 +0.4 -1.0 -0.6 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 -0.0 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.6 +0.0 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.4 -0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.3 -0.1 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.3 -0.1 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.3 -0.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.6 +0.0 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.5 -0.1 +0.2 -0.1
phage phage_bap4 +0.2 -0.4 -0.1 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.3 +0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.3 -0.0 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 +0.1 -0.1 +0.1
complex community Community=guar; Passage=4 +0.1 -0.6 +0.2 +0.2 -0.1
phage phage_bap4 +0.1 -0.5 +0.1 +0.2 +0.1
complex community Community=guar; Passage=4 +0.4 -0.6 +0.1 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.8 +0.0 -0.6 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.1 +0.1 -0.1 -0.1
no phage control no phage control +0.0 -0.3 +0.1 +0.3 +0.0
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 +0.1 -0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.0 +0.2 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.5 -0.1 -0.3 +0.1
complex community Community=Locust bean gum; Passage=1 -0.2 +0.2 +0.2 -0.0 +0.1
complex community Community=guar; Passage=4 +0.0 -0.4 +0.4 +0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.0 +0.4 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.1 +0.3 +0.2 +0.1
phage phage_bap4 +0.1 +0.1 -0.0 +0.4 +0.1
phage phage_bap4 +0.2 +0.2 +0.2 +0.2 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 -0.3 +0.7 +0.3 +0.1
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