Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1219 and GFF1220 are separated by 54 nucleotidesGFF1220 and GFF1221 are separated by 17 nucleotidesGFF1221 and GFF1222 overlap by 4 nucleotidesGFF1222 and GFF1223 are separated by 19 nucleotides GFF1219 - putative; ORF located using Glimmer/Genemark, at 84,140 to 84,865 GFF1219 GFF1220 - Pantoate--beta-alanine ligase (EC 6.3.2.1), at 84,920 to 85,771 GFF1220 GFF1221 - hypothetical protein, at 85,789 to 86,031 GFF1221 GFF1222 - Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94), at 86,028 to 87,050 GFF1222 GFF1223 - Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state), at 87,070 to 87,528 GFF1223
Group Condition GFF1219 GFF1220 GFF1221 GFF1222 GFF1223
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 N.D. N.D. -6.2 -1.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.3 N.D. N.D. -6.3 -1.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 N.D. N.D. -5.9 -1.0
carbon source Ying_AminoAcid20 rep B; time point 2 +0.0 N.D. N.D. -5.9 -0.8
carbon source Ying_AminoAcid20 rep C; time point 2 -0.2 N.D. N.D. -5.7 -0.7
carbon source Ying_all64 rep A; time point 3 +0.1 N.D. N.D. -5.2 -1.0
carbon source Ying_all64 rep B; time point 3 +0.0 N.D. N.D. -5.0 -1.0
carbon source Ying_AminoAcid20 rep A; time point 2 -0.2 N.D. N.D. -4.6 -0.7
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.1 N.D. N.D. -5.1 -0.4
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.2 N.D. N.D. -4.4 -0.6
carbon source Ying_all64 rep B; time point 2 -0.2 N.D. N.D. -4.0 -0.6
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.2 N.D. N.D. -4.2 -0.7
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.2 N.D. N.D. -3.7 -0.5
carbon source Ying_all64 rep A; time point 2 +0.1 N.D. N.D. -3.8 -0.7
carbon source Ying_AminoAcid20 rep B; time point 1 -0.1 N.D. N.D. -3.3 -0.7
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 N.D. N.D. -3.5 -0.5
carbon source Ying_sugar7 rep C; time point 3 +0.2 N.D. N.D. -3.5 -0.7
carbon source Ying_sugar7 rep A; time point 3 +0.3 N.D. N.D. -3.6 -0.6
carbon source Ying_sugar7 rep B; time point 3 +0.2 N.D. N.D. -3.1 -0.8
carbon source Ying_AminoAcid20 rep A; time point 1 +0.0 N.D. N.D. -3.2 -0.5
carbon source Ying_Others16 rep B; time point 3 +0.3 N.D. N.D. -3.4 -0.5
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 N.D. N.D. -3.1 -0.5
carbon source Ying_all64 rep C; time point 3 +0.2 N.D. N.D. -3.5 -0.4
carbon source Ying_Others16 rep C; time point 3 +0.2 N.D. N.D. -3.2 -0.5
carbon source Ying_Others16 rep A; time point 2 -0.1 N.D. N.D. -2.9 -0.5
carbon source Ying_all64 rep C; time point 1 -0.2 N.D. N.D. -2.6 -0.5
carbon source Ying_AminoAcid20 rep C; time point 1 -0.0 N.D. N.D. -2.9 -0.5
carbon source Ying_all64 rep B; time point 1 -0.2 N.D. N.D. -2.3 -0.5
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.0 N.D. N.D. -2.7 -0.4
carbon source Ying_Nucleobase14 rep C; time point 2 -0.4 N.D. N.D. -2.0 -0.7
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