Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_00605	PS417_00610	PS417_00615	PS417_00620	PS417_00625
phage	P. simiae Grant Run MOI 0.1	-0.1	+0.3	-0.4	-0.1	-1.5
phage	P. simiae OR Antrim MOI 1	-0.1	+0.4	-0.4	+0.4	-2.1
phage	P. simiae OR Antrim MOI 10	-0.2	-0.2	-0.0	+0.2	-1.5
phage	P. simiae Grant Run MOI 0.1	-0.0	-0.0	+0.3	-0.3	-1.5
phage	JP1 MOI 0.1	-0.0	+0.3	-0.5	-0.1	-1.2
phage	P. simiae ORA MOI 10	-0.1	+0.3	-0.6	+0.4	-1.5
phage	JP1 MOI 10	+0.0	-0.3	-0.3	+0.5	-1.3
phage	P. simiae OR Antrim MOI 1	-0.0	-0.3	+0.2	+0.3	-1.4
phage	JP1 MOI 1	-0.1	+0.3	+0.1	+0.1	-1.5
phage	JP1 MOI 10	-0.2	+0.4	-0.2	+0.5	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.0	-0.4	+0.4	-0.9
phage	P. simiae Grant Run MOI 10	+0.0	-0.3	-0.2	+0.7	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.1	-0.0	+0.8	-1.2
phage	P. simiae OR Antrim MOI 0.1	-0.1	-0.0	-0.0	+0.8	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.2	+0.2	+0.7	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	+0.3	-0.5	+0.5	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.5	+0.1	+0.8	-0.6
phage	P. simiae OR Antrim MOI 0.1	-0.1	+0.4	+0.2	+0.5	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.1	+0.1	+1.1	-0.9
solid stress	Fraxetin 3 mM; solid stress	+0.3	+0.3	+0.0	-0.6	+0.8
stress	Neomycin 0.04 mg/ml	-0.0	-0.3	+0.3	-0.3	+1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	+0.6	+0.6	-0.5	+0.2
stress	Dimethyl Sulfoxide 5 vol%	+0.1	-0.0	-0.0	-0.5	+1.5
soil	soil sample 5; outgrowth in LB	-0.0	-0.1	-0.1	+2.0	-0.4
soil	soil sample 2; outgrowth in LB	+0.0	-0.3	-0.1	+1.9	+0.2
soil	soil sample 8; outgrowth in LB	-0.1	+0.2	+0.4	+1.1	+0.2
soil	soil sample 6; outgrowth in LB	-0.0	+0.3	-0.3	+1.7	+0.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.1	+0.1	+0.2	+1.7	-0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	+0.2	+0.2	+1.6	+0.2
root	root sample 6; outgrowth in LB	-0.2	-0.1	-0.1	+2.2	+0.6