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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF119 and GFF120 are separated by 86 nucleotides
GFF120 and GFF121 are separated by 199 nucleotides
GFF121 and GFF122 are separated by 14 nucleotides
GFF122 and GFF123 are separated by 159 nucleotides
GFF119 - hypothetical protein, at 106,453 to 106,572
GFF119
GFF120 - Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4), at 106,659 to 108,083
GFF120
GFF121 - Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12), at 108,283 to 110,172
GFF121
GFF122 - Pyruvate dehydrogenase E1 component (EC 1.2.4.1), at 110,187 to 112,850
GFF122
GFF123 - Transcriptional repressor for pyruvate dehydrogenase complex, at 113,010 to 113,774
GFF123
Group
Condition
GFF119
GFF120
GFF121
GFF122
GFF123
phage
6H2_phage 10 MOI; agar plate assay
+0.2
N.D.
-6.0
-4.5
-0.1
phage
Ffm_phage 10 MOI; agar plate assay
+1.0
N.D.
-6.0
-5.2
+0.8
phage
LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI
+0.8
N.D.
-3.5
-4.0
-0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+0.1
N.D.
-3.1
-2.1
-0.4
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-0.5
N.D.
-2.3
-2.1
-0.4
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-0.8
N.D.
-1.7
-2.5
-0.2
phage
LB_plus_SM_buffer with Ffm_phage 0.01875 MOI
-0.6
N.D.
-2.1
-1.9
-0.4
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.7
N.D.
-1.8
-2.1
-0.2
micoeukaryotes
Dictyostellum sp.mixed culture-1
-0.3
N.D.
-1.8
-1.8
-0.8
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
+0.7
N.D.
-2.7
-2.3
-0.4
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-1.2
N.D.
-1.6
-1.7
-0.2
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-1.2
N.D.
-1.3
-1.9
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.4
N.D.
-2.1
-1.6
-0.5
micoeukaryotes
Dictyostellum sp.mixed culture-2
-0.2
N.D.
-2.2
-2.0
-0.2
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.1
N.D.
-2.5
-2.0
-0.3
lb_plus_sm_buffer
LB_plus_SM_buffer
-0.6
N.D.
-2.0
-1.7
-0.2
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
-0.9
N.D.
-1.8
-1.5
-0.3
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
+0.8
N.D.
-2.5
-2.2
-0.2
micoeukaryotes
C.elegans, mixed culture-1
+0.4
N.D.
-1.7
-2.2
-0.3
phage
phi19h1_phage 15 MOI
+0.6
N.D.
-2.5
-2.0
+0.4
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.5
N.D.
-1.9
-1.8
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.9
N.D.
+2.7
+2.3
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.9
N.D.
+2.6
+3.1
+0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.5
N.D.
+2.8
+3.1
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+1.3
N.D.
+1.9
+2.5
+0.4
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.9
N.D.
+2.6
+2.4
+0.7
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.3
N.D.
+2.8
+3.2
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.1
N.D.
+2.4
+3.0
+0.7
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.5
N.D.
+2.8
+3.3
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+1.4
N.D.
+3.6
+4.0
+1.3
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