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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1202 and GFF1203 are separated by 5 nucleotides
GFF1203 and GFF1204 are separated by 72 nucleotides
GFF1204 and GFF1205 are separated by 105 nucleotides
GFF1205 and GFF1206 are separated by 175 nucleotides
GFF1202 - Domain of unknown function DUF4440, at 1,217,940 to 1,218,422
GFF1202
GFF1203 - Di-tripeptide/cation symporter, at 1,218,428 to 1,219,921
GFF1203
GFF1204 - Homoserine O-acetyltransferase (EC 2.3.1.31), at 1,219,994 to 1,221,073
GFF1204
GFF1205 - Carboxypeptidase-related protein, at 1,221,179 to 1,222,735
GFF1205
GFF1206 - hypothetical protein, at 1,222,911 to 1,224,449
GFF1206
Group
Condition
GFF1202
GFF1203
GFF1204
GFF1205
GFF1206
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.0
-0.1
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.3
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
-0.3
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.1
-0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
-0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.0
+0.0
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
+0.2
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.0
+0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.1
-0.0
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.2
+0.3
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.0
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
+0.3
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.0
-0.1
+0.0
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