Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1193 and GFF1194 overlap by 27 nucleotidesGFF1194 and GFF1195 overlap by 4 nucleotidesGFF1195 and GFF1196 overlap by 4 nucleotidesGFF1196 and GFF1197 are separated by 84 nucleotides GFF1193 - Adenylate cyclase (EC 4.6.1.1), at 510,497 to 512,395 GFF1193 GFF1194 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 512,369 to 513,343 GFF1194 GFF1195 - iron-sulphur protein, at 513,340 to 514,575 GFF1195 GFF1196 - BUG/TctC family periplasmic protein, at 514,572 to 515,579 GFF1196 GFF1197 - Transcriptional regulator, LysR family, at 515,664 to 516,599 GFF1197
Group Condition GFF1193 GFF1194 GFF1195 GFF1196 GFF1197
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 -0.2 -0.1 -0.3
phage phage_bap4 -0.3 -0.2 +0.1 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -0.4 -0.0 -0.1
complex community Community=Kojac gum; Passage=4 -0.1 +0.1 -0.4 -0.3 +0.1
complex community Community=guar; Passage=4 -0.2 -0.4 -0.3 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 -0.0 -0.3 -0.2 -0.3
phage phage_bap4 -0.1 -0.2 +0.1 -0.2 -0.0
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 -0.4 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.1 -0.1 -0.0 -0.3
complex community Community=Locust bean gum; Passage=1 -0.2 +0.1 -0.1 -0.1 +0.1
no phage control no phage control +0.0 -0.0 +0.2 -0.1 -0.3
complex community Community=guar; Passage=4 +0.2 -0.3 -0.2 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 +0.0 -0.2 +0.2
complex community Community=guar; Passage=4 +0.2 -0.3 +0.0 -0.3 +0.3
phage phage_bap4 -0.1 -0.1 +0.2 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.0 -0.1 -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.2 +0.0 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.1 +0.1 +0.2 -0.2
phage phage_bap4 +0.1 -0.1 +0.2 -0.1 +0.2
phage phage_bap4 -0.1 -0.0 +0.2 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.0 +0.2 +0.2
complex community Community=guar; Passage=4 +0.2 -0.3 -0.0 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.2 +0.1 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 -0.0 +0.3 +0.4 -0.5
no phage control no phage control +0.2 -0.0 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 +0.1 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.1 +0.1 +0.2
no phage control no phage control +0.1 -0.1 +0.4 +0.0 +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 +0.1 +0.1 +0.5
remove
GFF1193
plot		 remove
GFF1194
plot		 remove
GFF1195		 remove
GFF1196
plot		 remove
GFF1197
plot