Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1183 and GFF1184 are separated by 342 nucleotidesGFF1184 and GFF1185 are separated by 12 nucleotidesGFF1185 and GFF1186 are separated by 544 nucleotidesGFF1186 and GFF1187 are separated by 5 nucleotides GFF1183 - Regulator of nucleoside diphosphate kinase, at 500,132 to 500,533 GFF1183 GFF1184 - UPF0060 membrane protein YnfA, at 500,876 to 501,208 GFF1184 GFF1185 - Transcriptional regulator, AraC family, at 501,221 to 502,084 GFF1185 GFF1186 - Ferrichrome-iron receptor, at 502,629 to 504,782 GFF1186 GFF1187 - Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3), at 504,788 to 505,729 GFF1187
Group Condition GFF1183 GFF1184 GFF1185 GFF1186 GFF1187
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.3 -0.2 -5.3
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.3 +0.2 -4.8
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +0.0 +0.0 -4.8
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.5 +0.2 -4.8
complex community Community=Kojac gum; Passage=4 N.D. -0.2 +0.2 +0.0 -4.8
complex community Community=guar; Passage=4 N.D. -0.2 +0.4 -0.0 -2.7
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.0 -0.1 -1.5
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 +0.5 -0.4 -1.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 +0.6 +0.2 -2.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.6 +0.3 -0.6
complex community Community=guar; Passage=4 N.D. +0.2 -0.2 -0.1 -0.7
complex community Community=guar; Passage=4 N.D. +0.3 -0.3 +0.1 -0.7
phage phage_bap4 N.D. -0.4 -0.1 -0.1 -0.0
phage phage_bap4 N.D. -0.0 -0.2 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.0 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 -0.0 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.0 +0.0 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.0 -0.1 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 +0.2 -0.1 -0.4
complex community Community=guar; Passage=4 N.D. +0.3 +0.4 +0.3 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.3 +0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.0 +0.1 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 +0.2 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.2 +0.1 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 +0.1 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 -0.0 +0.1 +0.3
no phage control no phage control N.D. -0.1 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.0 +0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.1 +0.1 +0.2
no phage control no phage control N.D. +0.0 +0.3 -0.1 +0.1
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