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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1183 and GFF1184 are separated by 211 nucleotides
GFF1184 and GFF1185 are separated by 80 nucleotides
GFF1185 and GFF1186 are separated by 219 nucleotides
GFF1186 and GFF1187 overlap by 4 nucleotides
GFF1183 - Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4), at 1,188,042 to 1,190,555
GFF1183
GFF1184 - hypothetical protein, at 1,190,767 to 1,191,972
GFF1184
GFF1185 - Nitrate transporter NasA, at 1,192,053 to 1,193,297
GFF1185
GFF1186 - Nitrate ABC transporter, substrate-binding protein, at 1,193,517 to 1,194,731
GFF1186
GFF1187 - Response regulator NasT, at 1,194,728 to 1,195,309
GFF1187
Group
Condition
GFF1183
GFF1184
GFF1185
GFF1186
GFF1187
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.2
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.1
-0.1
+0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
-0.1
-0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
-0.2
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.2
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
-0.1
-0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
-0.1
+0.5
-0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.2
-0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.1
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.1
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.3
+0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.1
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.1
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.0
-0.2
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.0
-0.1
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.0
-0.1
+0.1
+0.1
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