Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1170 and GFF1171 are separated by 34 nucleotidesGFF1171 and GFF1172 are separated by 13 nucleotidesGFF1172 and GFF1173 overlap by 4 nucleotidesGFF1173 and GFF1174 are separated by 141 nucleotides GFF1170 - Possible hypoxanthine oxidase XdhD (EC 1.-.-.-), at 485,559 to 487,889 GFF1170 GFF1171 - Transcriptional regulator, AraC family, at 487,924 to 488,823 GFF1171 GFF1172 - hypothetical protein, at 488,837 to 489,241 GFF1172 GFF1173 - P-hydroxybenzoate hydroxylase (EC 1.14.13.2), at 489,238 to 490,419 GFF1173 GFF1174 - Transcriptional regulator, IclR family, at 490,561 to 491,331 GFF1174
Group Condition GFF1170 GFF1171 GFF1172 GFF1173 GFF1174
complex community Community=Locust bean gum; Passage=4 -0.4 -0.5 -1.0 -0.4 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 -0.4 -0.7 -0.6 -0.0
complex community Community=Kojac gum; Passage=4 -0.4 -0.3 -0.7 -0.3 -0.0
complex community Community=arabino-guar; Passage=4 -0.4 +0.3 -0.5 -0.8 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 -0.3 -0.8 -0.0
complex community Community=guar; Passage=4 +0.0 -0.6 +0.5 -0.5 -0.4
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 -0.1 -0.7 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 -0.1 -0.3 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.2 -0.1 -0.0 -0.0
phage phage_bap4 -0.1 +0.1 -0.1 -0.2 -0.4
complex community Community=Locust bean gum; Passage=4 -0.2 +0.3 -0.2 -0.9 +0.4
phage phage_bap4 -0.0 -0.2 +0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.0 +0.1 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 -0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.0 -0.6 +0.3 +0.2
complex community Community=guar; Passage=4 +0.2 -0.4 -0.0 -0.4 +0.3
phage phage_bap4 -0.1 +0.1 -0.5 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.3 -0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.1 +0.0 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.4 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.3 +0.0 +0.3
complex community Community=guar; Passage=4 -0.3 +0.5 +0.2 -0.7 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.1 +0.2 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 +0.5 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 -0.2 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 +0.2 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 -0.4 +0.1 +0.2
no phage control no phage control +0.1 +0.2 -0.2 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.3 +0.6 -0.2 +0.3
complex community Community=guar; Passage=4 -0.0 +0.4 +0.3 -0.1 +0.1
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