Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF115 and GFF116 are separated by 3 nucleotidesGFF116 and GFF117 are separated by 188 nucleotidesGFF117 and GFF118 are separated by 13 nucleotidesGFF118 and GFF119 overlap by 4 nucleotides GFF115 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 143,390 to 144,055 GFF115 GFF116 - RidA/YER057c/UK114 superfamily, group 1, at 144,059 to 144,571 GFF116 GFF117 - no description, at 144,760 to 145,539 GFF117 GFF118 - putative membrane protein, at 145,553 to 146,578 GFF118 GFF119 - FIG00348677: hypothetical protein, at 146,575 to 148,503 GFF119
Group Condition GFF115 GFF116 GFF117 GFF118 GFF119
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 -2.1 -0.6 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.6 -0.6 -0.6 -0.6
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 -2.2 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.0 +0.2 -1.8 -0.3 +0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.1 -1.0 -0.2 +0.2
complex community Community=guar; Passage=4 -0.2 -0.1 -0.7 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.1 -0.2 -0.7 -0.3 +0.2
complex community Community=Kojac gum; Passage=4 -0.1 -1.0 -0.3 +0.5 +0.0
complex community Community=guar; Passage=4 -0.0 -0.2 -0.6 -0.2 +0.2
complex community Community=Kojac gum; Passage=1 -0.1 -0.1 -0.4 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 -0.3 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.3 -0.4 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 -0.7 -0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.6 +0.1 +0.2
phage phage_bap4 -0.3 -0.1 -0.2 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 -0.5 -0.1 -0.1
complex community Community=Locust bean gum; Passage=1 +0.1 -0.3 -0.1 -0.3 +0.1
complex community Community=guar; Passage=4 +0.2 -0.1 -0.6 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 -1.0 +0.1 +0.2
complex community Community=guar; Passage=4 -0.4 -0.1 -0.1 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.3 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 -0.2 -0.0 +0.2
complex community Community=Locust bean gum; Passage=4 +0.4 -0.4 +0.2 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 -0.5 -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.2 -0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 -0.3 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 -0.3 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.4 +0.2 -0.1 +0.2
phage phage_bap4 +0.2 +0.0 +0.2 +0.2 +0.2
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