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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1164 and GFF1165 are separated by 63 nucleotides
GFF1165 and GFF1166 are separated by 117 nucleotides
GFF1166 and GFF1167 are separated by 75 nucleotides
GFF1167 and GFF1168 are separated by 30 nucleotides
GFF1164 - 2-isopropylmalate synthase (EC 2.3.3.13), at 478,256 to 479,959
GFF1164
GFF1165 - 2-isopropylmalate synthase (EC 2.3.3.13), at 480,023 to 481,561
GFF1165
GFF1166 - Murein-DD-endopeptidase (EC 3.4.99.-), at 481,679 to 482,884
GFF1166
GFF1167 - Predicted Lactate-responsive regulator, IclR family, at 482,960 to 483,781
GFF1167
GFF1168 - Arginyl-tRNA--protein transferase (EC 2.3.2.8), at 483,812 to 484,561
GFF1168
Group
Condition
GFF1164
GFF1165
GFF1166
GFF1167
GFF1168
complex community
Community=Locust bean gum; Passage=4
-1.5
-0.1
-0.6
-4.1
-0.4
complex community
Community=Locust bean gum; Passage=4
-1.2
-0.5
-0.5
-3.8
-0.5
complex community
Community=guar; Passage=4
-2.1
-0.2
-0.2
-3.2
-0.4
complex community
Community=Locust bean gum; Passage=4
-0.9
-0.2
-0.6
-4.1
-0.5
complex community
Community=guar; Passage=4
-2.0
-0.2
-0.4
-3.1
-0.4
complex community
Community=guar; Passage=4
-2.4
-0.1
-0.2
-3.0
-0.4
complex community
Community=Locust bean gum; Passage=4
-0.8
-0.2
-0.3
-4.3
-0.2
complex community
Community=guar; Passage=4
-1.8
+0.1
-0.2
-3.6
-0.2
complex community
Community=arabino-guar; Passage=4
-1.7
-0.4
-0.1
-2.5
-0.7
complex community
Community=arabino-guar; Passage=4
-1.7
-0.2
-0.0
-3.1
-0.4
complex community
Community=Kojac gum; Passage=4
-1.6
-0.2
-0.1
-3.1
-0.2
complex community
Community=arabino-guar; Passage=4
-1.6
-0.1
-0.2
-2.9
-0.3
complex community
Community=arabino-guar; Passage=4
-1.7
-0.3
-0.2
-2.5
-0.3
phage
phage_bap4
-0.1
-0.2
-0.2
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.1
-0.0
-0.5
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.1
-0.1
-0.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
+0.1
-0.1
-0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
+0.1
-0.0
-0.5
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.2
-0.1
-0.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.2
-0.1
-0.5
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
+0.1
-0.0
-0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.2
-0.1
-0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.2
-0.1
-0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
+0.3
-0.1
-0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.3
+0.4
-0.1
-0.5
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
+0.2
-0.0
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.3
-0.1
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
+0.3
-0.0
-0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.3
-0.0
-0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.5
-0.0
-0.3
+0.1
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