Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_05870	PS417_05875	PS417_05880	PS417_05885	PS417_05890
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.2	-0.3	-4.6	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.1	+0.6	-4.7	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.2	+0.6	-4.7	N.D.
solid stress	Fraxetin 3 mM; solid stress	-0.0	-0.2	+0.1	-2.9	N.D.
solid stress	Fraxetin 3 mM; solid stress	-0.1	+0.0	+0.2	-2.6	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.1	+0.2	-0.5	-2.0	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.0	-0.3	-0.1	-1.9	N.D.
solid stress	Fraxetin 2 mM; solid stress	-0.3	+0.1	+0.1	-2.2	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.3	+0.0	-0.4	-1.5	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	-0.3	-0.1	-2.0	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.1	-0.0	-0.4	-1.8	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	+0.2	+0.2	-2.5	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	-0.4	-0.3	-1.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	-0.0	-0.6	-1.3	N.D.
seeds	Growth on radish seeds for 72 hours	-0.4	-0.8	+0.2	-0.8	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	+0.2	-0.1	-1.4	N.D.
supernatant control	Vogels_fungal_media 0.1X	+0.1	+0.2	-0.4	-1.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.2	-1.2	+0.2	N.D.
soil	soil sample 3; outgrowth in LB	+0.3	+0.0	-0.6	-1.1	N.D.
soil	soil sample 4; outgrowth in LB	+0.4	-0.1	-0.7	-0.8	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.5	-0.5	-0.9	N.D.
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7	-0.0	-0.9	+0.6	N.D.
soil	soil sample 5; outgrowth in LB	-0.1	+0.7	-0.7	-0.6	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	+0.2	+0.2	+0.6	-1.0	N.D.
nitrogen source	Adenine (N)	+0.2	+0.6	+0.9	-1.3	N.D.
liquid stress	Fraxetin 3 mM; liquid stress	+0.3	+0.1	+0.9	-0.7	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.2	-0.1	-0.3	+1.8	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+0.6	+0.8	+0.9	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.1	+0.3	-0.4	+3.0	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.1	+0.4	-0.1	+4.0	N.D.