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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1143 and GFF1144 are separated by 38 nucleotides
GFF1144 and GFF1145 are separated by 48 nucleotides
GFF1145 and GFF1146 are separated by 1 nucleotides
GFF1146 and GFF1147 are separated by 255 nucleotides
GFF1143 - no description, at 459,023 to 459,760
GFF1143
GFF1144 - hypothetical protein, at 459,799 to 461,700
GFF1144
GFF1145 - hypothetical protein, at 461,749 to 462,117
GFF1145
GFF1146 - Pyrophosphate-energized proton pump (EC 3.6.1.1), at 462,119 to 464,635
GFF1146
GFF1147 - Inorganic pyrophosphatase (EC 3.6.1.1), at 464,891 to 465,418
GFF1147
Group
Condition
GFF1143
GFF1144
GFF1145
GFF1146
GFF1147
phage
phage_bap4
-0.1
-0.1
-0.4
-0.1
N.D.
complex community
Community=arabino-guar; Passage=4
-0.1
-0.1
-0.3
-0.0
N.D.
phage
phage_bap4
-0.2
-0.1
-0.2
-0.1
N.D.
complex community
Community=guar; Passage=4
-0.1
-0.2
+0.0
-0.1
N.D.
phage
phage_bap4
+0.2
-0.1
-0.2
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.2
+0.1
-0.1
N.D.
phage
phage_bap4
+0.1
-0.2
-0.2
-0.1
N.D.
phage
phage_bap4
-0.1
-0.1
-0.2
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.0
-0.4
-0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
-0.0
-0.5
+0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.2
-0.3
-0.3
N.D.
complex community
Community=Locust bean gum; Passage=1
-0.3
+0.1
-0.1
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.0
-0.3
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.0
+0.1
-0.2
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.0
+0.1
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.1
-0.2
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
+0.2
-0.1
+0.1
N.D.
no phage control
no phage control
+0.2
+0.1
-0.1
+0.0
N.D.
phage
phage_bap4
+0.3
-0.1
-0.1
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
+0.1
-0.2
+0.1
N.D.
no phage control
no phage control
+0.2
-0.0
+0.1
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.3
+0.1
-0.1
+0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.1
-0.1
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.2
+0.0
+0.1
+0.1
N.D.
complex community
Community=arabino-guar; Passage=4
+0.3
+0.2
-0.1
+0.0
N.D.
complex community
Community=guar; Passage=4
+0.4
-0.0
+0.0
+0.1
N.D.
complex community
Community=guar; Passage=4
+0.1
+0.4
+0.1
-0.1
N.D.
complex community
Community=Kojac gum; Passage=4
+0.6
+0.2
-0.3
+0.2
N.D.
complex community
Community=guar; Passage=4
+0.2
+0.2
+0.3
-0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.5
+0.1
+0.4
-0.1
N.D.
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