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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1123 and GFF1124 are separated by 80 nucleotides
GFF1124 and GFF1125 are separated by 195 nucleotides
GFF1125 and GFF1126 are separated by 9 nucleotides
GFF1126 and GFF1127 are separated by 115 nucleotides
GFF1123 - GTP 3',8-cyclase (EC 4.1.99.22), at 439,135 to 440,292
GFF1123
GFF1124 - no description, at 440,373 to 441,074
GFF1124
GFF1125 - Superoxide dismutase [Mn] (EC 1.15.1.1), at 441,270 to 441,905
GFF1125
GFF1126 - Metal transporter, ZIP family, at 441,915 to 442,835
GFF1126
GFF1127 - Aldehyde dehydrogenase (EC 1.2.1.3), at 442,951 to 444,384
GFF1127
Group
Condition
GFF1123
GFF1124
GFF1125
GFF1126
GFF1127
complex community
Community=guar; Passage=4
-0.2
+0.1
-0.1
-1.0
-1.9
complex community
Community=guar; Passage=4
-0.0
+0.3
+0.1
-1.4
-1.6
complex community
Community=guar; Passage=4
+0.2
+0.2
+0.3
-1.0
-1.8
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.1
-0.0
-0.4
-1.5
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.0
+0.1
-0.4
-1.4
complex community
Community=arabino-guar; Passage=4
+0.1
-0.1
+0.1
-0.5
-1.3
complex community
Community=arabino-guar; Passage=4
+0.0
+0.0
+0.0
-0.4
-1.3
complex community
Community=Locust bean gum; Passage=4
+0.3
+0.1
+0.3
-0.6
-1.5
complex community
Community=Kojac gum; Passage=4
-0.0
+0.1
-0.1
-0.5
-0.9
complex community
Community=guar; Passage=4
+0.1
+0.2
+0.2
-0.3
-1.6
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.1
+0.2
+0.1
-1.5
complex community
Community=arabino-guar; Passage=4
+0.1
-0.0
-0.1
+0.7
-1.6
complex community
Community=arabino-guar; Passage=4
+0.1
+0.3
+0.2
+0.0
-1.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.0
-0.0
-0.6
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.1
+0.0
-0.3
+0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.1
-0.1
-0.4
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
-0.1
-0.2
+0.9
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.2
-0.1
+0.2
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
-0.2
+0.1
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.1
-0.0
-0.1
+0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.1
-0.1
-0.1
+0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.1
+0.0
-0.1
+0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
+0.0
-0.0
-0.3
+0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
-0.1
-0.3
+0.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.0
-0.0
-0.1
+0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.0
-0.1
-0.2
+1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.0
-0.2
-0.1
+1.0
no phage control
no phage control
+0.1
+0.1
+0.0
+0.5
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.0
-0.0
+0.2
+1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
-0.0
-0.1
+0.4
+0.9
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