Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1113 and GFF1114 overlap by 1 nucleotidesGFF1114 and GFF1115 are separated by 75 nucleotidesGFF1115 and GFF1116 are separated by 17 nucleotidesGFF1116 and GFF1118 overlap by 4 nucleotides GFF1113 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 430,063 to 430,878 GFF1113 GFF1114 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 430,878 to 431,720 GFF1114 GFF1115 - Putative transmembrane protein, at 431,796 to 432,980 GFF1115 GFF1116 - Membrane-bound lytic murein transglycosylase D, at 432,998 to 434,590 GFF1116 GFF1118 - Hydroxyacylglutathione hydrolase (EC 3.1.2.6), at 434,587 to 435,366 GFF1118
Group Condition GFF1113 GFF1114 GFF1115 GFF1116 GFF1118
complex community Community=Locust bean gum; Passage=4 -2.8 +0.1 -0.2 +0.0 -0.7
complex community Community=arabino-guar; Passage=4 -2.8 -0.2 +0.1 +0.1 -0.7
complex community Community=Kojac gum; Passage=4 -2.4 +0.1 -0.5 +0.1 -0.8
complex community Community=Locust bean gum; Passage=4 -3.0 +0.2 +0.1 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 -2.7 -0.2 +0.1 +0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -1.7 -0.2 -0.5 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -1.7 +0.1 +0.2 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.3 +0.1 -0.2 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus -1.3 -0.1 -0.0 +0.2 -0.3
complex community Community=Locust bean gum; Passage=4 -0.3 +0.1 -0.2 +0.1 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.0 +0.1 -0.2 +0.0 -0.1
complex community Community=guar; Passage=4 -1.4 +0.2 +0.2 +0.3 -0.4
phage phage_bap4 -0.5 -0.1 +0.0 -0.3 -0.2
phage phage_bap4 -0.7 +0.1 +0.0 -0.2 -0.2
complex community Community=Locust bean gum; Passage=1 -0.7 +0.0 -0.1 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 +0.2 -0.2 +0.0 -0.2
phage phage_bap4 -0.8 -0.1 +0.2 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 -0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.1 -0.2 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 +0.0 +0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 +0.1 +0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 -0.2 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.5 +0.1 -0.3 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 +0.1 -0.2 +0.0 -0.4
complex community Community=guar; Passage=4 +0.3 +0.1 +0.3 -0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 -0.2 -0.1 -0.0 -0.1
phage phage_bap4 +0.4 +0.1 +0.0 -0.2 -0.2
phage phage_bap4 +0.4 +0.1 +0.2 -0.3 -0.2
complex community Community=guar; Passage=4 +0.7 -0.1 +0.2 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 +1.6 +0.2 +0.1 +0.2 -0.3
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