Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_05590 and PS417_05595 overlap by 4 nucleotidesPS417_05595 and PS417_05600 are separated by 435 nucleotidesPS417_05600 and PS417_05605 are separated by 77 nucleotidesPS417_05605 and PS417_05610 are separated by 69 nucleotides PS417_05590: PS417_05590 - iron ABC transporter ATP-binding protein, at 1,258,012 to 1,259,121 _05590 PS417_05595: PS417_05595 - ornithine carbamoyltransferase, at 1,259,118 to 1,260,038 _05595 PS417_05600: PS417_05600 - dehydrogenase, at 1,260,474 to 1,262,582 _05600 PS417_05605: PS417_05605 - glutaredoxin, at 1,262,660 to 1,262,998 _05605 PS417_05610: PS417_05610 - bacterioferritin, at 1,263,068 to 1,263,538 _05610
Group Condition PS417_05590 PS417_05595 PS417_05600 PS417_05605 PS417_05610
solid stress Fraxetin 3 mM; solid stress -3.8 -3.4 -0.0 N.D. -1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -6.2 +0.2 N.D. -0.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.0 -7.7 -0.1 N.D. -0.1
solid stress Fraxetin 3 mM; solid stress -2.8 -2.6 -0.0 N.D. -2.3
solid stress Fraxetin 3 mM; solid stress -3.3 -2.2 -0.0 N.D. -2.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 -6.6 +0.0 N.D. -0.4
carbon source L-Valine (C) -0.0 -5.5 -0.2 N.D. -1.1
solid stress Fraxetin 3 mM; solid stress -2.7 -2.3 +0.1 N.D. -1.7
carbon source L-Valine (C) -0.3 -5.8 -0.0 N.D. -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -4.9 -0.2 N.D. -1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 -6.8 -0.1 N.D. +0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 -5.2 +0.0 N.D. -0.8
solid stress Fraxetin 2 mM; solid stress -3.0 -2.2 +0.1 N.D. -0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 -6.0 -0.1 N.D. -0.3
solid stress Fraxetin 2 mM; solid stress -2.4 -2.9 +0.1 N.D. -0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 -5.1 +0.0 N.D. -0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -5.2 +0.3 N.D. -0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 -4.8 -0.1 N.D. -0.7
liquid stress Fraxetin 3 mM; liquid stress -3.7 -1.6 -0.1 N.D. -0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 -4.9 +0.1 N.D. -0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 -5.2 -0.2 N.D. -0.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -4.4 -0.0 N.D. -0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 -5.3 -0.1 N.D. +0.1
solid stress Fraxetin 2 mM; solid stress -2.5 -1.6 -0.1 N.D. -1.0
liquid stress Fraxetin 3 mM; liquid stress -3.3 -1.3 +0.0 N.D. -0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -5.4 +0.1 N.D. +1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -3.5 +0.2 N.D. -1.2
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -3.5 -1.7 +0.1 N.D. +0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 -4.9 +0.1 N.D. +0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 -3.9 +0.2 N.D. +0.5
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