Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_05490	PS417_05495	PS417_05500	PS417_05505	PS417_05510
stress	Doxycycline hyclate 0.001 mg/ml	-0.1	-0.7	-4.2	-3.1	-3.0
stress	Polymyxin B sulfate 0.006 mg/ml	+0.1	-0.4	-2.5	-3.5	-2.6
stress	Tetracycline 0.001 mg/ml	+0.3	-0.5	-3.0	-2.5	-2.7
stress	Neomycin 0.04 mg/ml	+0.8	-0.9	-2.8	-2.4	-2.4
stress	Gentamicin 0.008 mg/ml	+0.3	+0.2	-2.1	-2.2	-2.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	+0.0	-2.5	-1.7	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.1	+0.1	-1.5	-1.8	-2.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.1	-0.1	-1.5	-1.9	-2.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	+0.5	-0.7	-2.6	-1.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.4	-0.2	-1.9	-0.9	-1.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.2	+0.1	-0.9	-1.2	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.0	+0.0	-0.9	-1.3	-1.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	+0.1	-0.7	-1.0	-2.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.1	-0.3	-1.3	-0.7	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.2	-0.0	-0.7	-1.2	-1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	+0.2	-0.1	-1.8	-2.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.8	-1.0	+0.0	-1.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.1	+0.1	-1.7	-0.7	-0.8
solid stress	Fraxetin 3 mM; solid stress	+0.1	+0.2	-2.0	-0.4	-0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.2	+0.5	-1.6	-1.1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.1	-2.5	-0.6	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.4	-1.4	-0.6	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7	+0.8	-0.4	-1.5	-0.2
stress	Benzalkonium Chloride 0.012 mg/ml	+0.2	+0.0	+1.1	+1.0	+1.1
carbon source	L-Valine (C)	-0.1	+0.6	+1.1	+0.7	+1.2
carbon source	Trisodium citrate (C)	+0.4	-0.2	-1.4	-0.9	+5.7
carbon source	L-Valine (C)	+0.0	+0.4	+1.5	+1.1	+0.9
carbon source	Trisodium citrate (C)	-0.0	-0.2	-0.2	-1.4	+6.3
carbon source	octanoate (C)	-0.0	+0.9	+1.1	+1.5	+1.2
carbon source	octanoate (C)	+0.1	+1.0	+1.5	+1.3	+1.1