Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1078 and GFF1079 are separated by 1 nucleotidesGFF1079 and GFF1080 are separated by 3 nucleotidesGFF1080 and GFF1081 are separated by 93 nucleotidesGFF1081 and GFF1082 are separated by 78 nucleotides GFF1078 - Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3), at 261,121 to 263,583 GFF1078 GFF1079 - Homoserine kinase (EC 2.7.1.39), at 263,585 to 264,514 GFF1079 GFF1080 - Threonine synthase (EC 4.2.3.1), at 264,518 to 265,804 GFF1080 GFF1081 - UPF0246 protein YaaA, at 265,898 to 266,671 GFF1081 GFF1082 - Putative alanine/glycine transport protein, at 266,750 to 268,207 GFF1082
Group Condition GFF1078 GFF1079 GFF1080 GFF1081 GFF1082
phage Ffm_phage 10 MOI; agar plate assay +0.0 -5.9 -0.2 -0.5 -0.1
phage LB_plus_SM_buffer with P22_phage 15 MOI -0.0 -3.5 +0.4 +0.4 +0.3
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.1 -0.9 -0.1 -0.1 -1.0
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.2 -1.7 +0.0 -0.3 -0.1
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI +0.0 -0.6 -0.2 -0.7 +0.1
phage Br60_phage 15 MOI +0.1 -1.3 -0.0 -0.2 +0.2
lb_plus_sm_buffer LB_plus_SM_buffer +0.0 -0.4 +0.1 -0.7 +0.2
nophagecontrol No phage control +0.2 -0.6 +0.0 -0.5 +0.2
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.1 -1.5 +0.1 +0.4 +0.3
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI +0.1 +0.5 -0.2 -0.6 +0.1
phage phi19h1_phage 15 MOI +0.1 +0.5 +0.1 -0.8 -0.1
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI +0.1 +0.4 -0.1 -0.7 +0.3
phage phi19h1_phage 15 MOI +0.1 +0.9 -0.2 -0.6 -0.0
phage LB_plus_SM_buffer with Br60_phage 0.00005 MOI +0.1 +0.5 +0.3 -0.5 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI +0.0 -0.9 -0.1 -0.2 +1.7
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.3 +0.3 +0.1 +0.2 +0.8
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI -0.1 +0.3 +0.1 +0.0 +0.9
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.1 +0.3 +0.2 +0.0 +0.8
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI +0.1 +0.8 -0.2 -0.2 +0.9
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.3 +0.4 +0.4 +0.2 +1.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI -0.3 +0.9 +0.2 +0.0 +1.4
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.2 -0.0 +0.5 +0.1 +1.7
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.3 +2.9 +0.0 -0.5 -0.2
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.0 +0.9 +1.3 -0.4 +0.9
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.4 +1.1 +0.5 +0.5 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.2 +0.7 +0.5 +0.3 +1.2
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +0.2 +0.7 +0.1 +0.2 +2.1
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.4 +0.7 +0.6 +0.2 +1.6
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.3 +0.4 +0.7 +0.2 +1.9
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.3 +0.4 +0.3 -0.1 +3.2
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