Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_05355	PS417_05360	PS417_05365	PS417_05370	PS417_05380
solid stress	Fraxetin 2 mM; solid stress	-0.1	+0.1	-4.7	-0.3	-0.0
solid stress	Fraxetin 3 mM; solid stress	-0.0	-0.0	-3.4	-0.8	+0.1
solid stress	Fraxetin 3 mM; solid stress	-0.1	+0.2	-3.3	-0.7	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.1	-4.3	+0.3	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.0	-3.3	-0.6	+0.0
solid stress	Fraxetin 3 mM; solid stress	-0.1	+0.1	-3.2	-0.6	+0.0
liquid stress	Fraxetin 3 mM; liquid stress	+0.1	-0.1	-3.6	-0.3	+0.2
solid stress	Fraxetin 2 mM; solid stress	+0.1	-0.0	-3.3	-0.5	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.0	-4.3	+0.4	+0.3
liquid stress	Fraxetin 3 mM; liquid stress	-0.0	+0.1	-3.2	-0.3	+0.0
liquid stress	Fraxetin 2 mM; liquid stress	-0.1	+0.1	-3.1	-0.1	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.1	-3.5	-0.2	+0.1
agar plate interaction control	Taped volatile agar plate with no fungus	+0.0	-0.2	-3.1	-0.3	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.0	-2.8	-0.7	+0.5
solid stress	Fraxetin 1 mM; solid stress	+0.1	-0.0	-3.1	+0.1	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.1	-3.3	+0.3	-0.1
soil	soil sample 3; outgrowth in LB	-0.3	-0.1	-2.1	-0.6	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	-0.0	-2.5	-0.3	-0.0
stress	methylglyoxal 0.032 vol%	-0.4	-0.0	-2.3	+0.6	-0.7
liquid stress	Fraxetin 2 mM; liquid stress	-0.0	+0.1	-2.8	+0.1	-0.1
solid stress	Fraxetin 1 mM; solid stress	+0.2	+0.2	-2.3	-0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3	-0.0	-2.2	-0.4	+0.1
phage	P. simiae ORA MOI 0.1	-0.1	+0.1	-2.0	-0.5	+0.5
solid stress	Fraxetin 2 mM; solid stress	-0.0	+0.1	-2.6	+0.2	+0.4
soil	soil sample 8; outgrowth in LB	+0.4	-0.1	-2.9	+0.3	+0.3
supernatant control	Vogels_fungal_media 0.1X	+0.3	-0.0	-1.9	-0.5	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.1	+0.8	-1.1	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+0.2	-0.4	-0.8	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+0.3	+1.4	+0.3	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.1	+1.4	+0.2	-0.4