Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF103 and GFF104 are separated by 71 nucleotidesGFF104 and GFF105 are separated by 23 nucleotidesGFF105 and GFF106 overlap by 4 nucleotidesGFF106 and GFF107 overlap by 4 nucleotides GFF103 - General secretion pathway protein E, at 129,137 to 130,489 GFF103 GFF104 - General secretion pathway protein D, at 130,561 to 133,152 GFF104 GFF105 - hypothetical protein, at 133,176 to 133,748 GFF105 GFF106 - no description, at 133,745 to 134,890 GFF106 GFF107 - General secretion pathway protein K, at 134,887 to 135,846 GFF107
Group Condition GFF103 GFF104 GFF105 GFF106 GFF107
complex community Community=arabino-guar; Passage=4 -0.3 +0.4 N.D. -0.2 -3.0
complex community Community=guar; Passage=4 -0.0 -0.3 N.D. -0.3 -1.8
complex community Community=arabino-guar; Passage=4 -0.9 +0.2 N.D. +0.2 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 +0.2 N.D. +0.1 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 N.D. -0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.1 N.D. -0.3 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 -0.1 N.D. +0.1 -0.5
complex community Community=Kojac gum; Passage=1 -1.0 +0.1 N.D. -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.6 -0.1 N.D. +0.1 -0.3
complex community Community=Kojac gum; Passage=4 -0.0 -0.6 N.D. -1.0 +0.8
phage phage_bap4 -1.1 +0.0 N.D. -0.2 +0.5
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 N.D. +0.2 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.1 N.D. +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.2 N.D. -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.7 +0.0 N.D. +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 +0.1 N.D. +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.9 +0.4 N.D. -0.5 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.0 N.D. +0.3 -1.0
complex community Community=arabino-guar; Passage=4 +0.9 -0.3 N.D. +0.1 -0.8
phage phage_bap4 -0.3 +0.1 N.D. +0.4 -0.1
no phage control no phage control +0.4 -0.1 N.D. +0.3 -0.4
phage phage_bap4 +0.3 +0.0 N.D. -0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +1.0 -0.0 N.D. -0.0 -0.2
phage phage_bap4 -0.3 +0.3 N.D. +0.2 +0.6
complex community Community=guar; Passage=4 +0.6 -0.2 N.D. +0.6 +0.1
complex community Community=Locust bean gum; Passage=4 +0.8 +0.1 N.D. -0.5 +0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.7 +0.2 N.D. +0.2 +0.0
complex community Community=guar; Passage=4 +0.8 +0.2 N.D. -0.0 +0.2
no phage control no phage control +0.6 -0.0 N.D. +0.2 +0.5
complex community Community=guar; Passage=4 +1.3 +0.1 N.D. -0.0 +0.4
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