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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1042 and GFF1043 overlap by 4 nucleotides
GFF1043 and GFF1044 overlap by 4 nucleotides
GFF1044 and GFF1045 are separated by 19 nucleotides
GFF1045 and GFF1046 overlap by 11 nucleotides
GFF1042 - hypothetical cytochrome oxidase associated membrane protein, at 781,562 to 782,179
GFF1042
GFF1043 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 782,176 to 782,859
GFF1043
GFF1044 - Copper-containing nitrite reductase (EC 1.7.2.1), at 782,856 to 783,473
GFF1044
GFF1045 - Cytochrome c oxidase subunit CcoO (EC 1.9.3.1), at 783,493 to 784,083
GFF1045
GFF1046 - Cytochrome c oxidase subunit CcoN (EC 1.9.3.1), at 784,073 to 785,716
GFF1046
Group
Condition
GFF1042
GFF1043
GFF1044
GFF1045
GFF1046
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.5
-0.7
-0.3
+0.0
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
-0.4
-0.1
-0.1
-0.1
carbon source
Ying_Others16 rep A; time point 1
+0.0
-0.3
-0.1
-0.1
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.0
-0.3
-0.3
-0.0
-0.1
carbon source
Ying_sugar7 rep A; time point 1
-0.0
-0.4
+0.0
+0.0
-0.2
carbon source
Ying_Others16 rep B; time point 2
+0.0
-0.3
-0.1
-0.1
+0.1
carbon source
Ying_Others16 rep C; time point 3
-0.1
-0.3
-0.1
+0.1
+0.0
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-0.3
-0.0
-0.1
+0.1
carbon source
Ying_all64 rep A; time point 2
+0.1
-0.1
-0.1
-0.2
-0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.1
-0.3
+0.3
-0.2
-0.2
carbon source
Ying_all64 rep A; time point 1
+0.1
-0.1
-0.1
-0.2
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
+0.0
-0.1
-0.1
-0.2
carbon source
Ying_all64 rep A; time point 3
+0.1
-0.3
-0.2
+0.1
+0.2
carbon source
Ying_sugar7 rep C; time point 1
-0.2
+0.1
+0.1
-0.2
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.3
-0.0
+0.0
-0.2
-0.1
carbon source
Ying_all64 rep B; time point 2
+0.2
-0.5
+0.1
-0.0
+0.2
carbon source
Ying_Others16 rep C; time point 1
+0.2
-0.3
+0.1
-0.0
+0.0
carbon source
Ying_all64 rep B; time point 1
+0.2
+0.4
-0.2
-0.0
-0.3
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.0
+0.3
+0.1
-0.2
-0.2
carbon source
Ying_all64 rep B; time point 3
+0.2
+0.2
-0.2
+0.1
-0.2
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.1
+0.3
-0.0
-0.1
-0.2
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.1
+0.3
-0.0
-0.1
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.1
+0.2
+0.1
-0.2
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 3
+0.1
+0.3
-0.3
+0.1
-0.0
carbon source
Ying_sugar7 rep B; time point 2
+0.2
+0.5
-0.3
-0.0
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.2
+0.2
+0.1
-0.1
-0.1
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.3
+0.2
+0.1
-0.1
-0.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.2
+0.3
+0.1
+0.0
-0.1
carbon source
Ying_all64 rep C; time point 2
+0.0
+0.7
-0.3
+0.0
+0.2
carbon source
Ying_all64 rep C; time point 3
+0.3
+1.1
-0.4
+0.1
+0.3
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