Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1036 and GFF1037 are separated by 405 nucleotidesGFF1037 and GFF1038 are separated by 37 nucleotidesGFF1038 and GFF1039 are separated by 15 nucleotidesGFF1039 and GFF1040 are separated by 170 nucleotides GFF1036 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 352,041 to 354,008 GFF1036 GFF1037 - putative membrane protein, at 354,414 to 355,331 GFF1037 GFF1038 - hypothetical protein, at 355,369 to 356,274 GFF1038 GFF1039 - Far-related protein, at 356,290 to 357,171 GFF1039 GFF1040 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 357,342 to 358,244 GFF1040
Group Condition GFF1036 GFF1037 GFF1038 GFF1039 GFF1040
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.4 -0.2 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.3 +0.1 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.2 +0.0 -0.1 -0.5
complex community Community=arabino-guar; Passage=4 +0.0 -0.5 -0.1 +0.2 -0.2
phage phage_bap4 -0.0 -0.1 +0.0 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 +0.1 -0.1 -0.5
phage phage_bap4 -0.0 -0.3 +0.0 -0.1 -0.2
complex community Community=guar; Passage=4 -0.0 -0.3 +0.0 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.1 -0.0 -0.1 -0.4
no phage control no phage control -0.1 -0.2 +0.0 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.3 +0.0 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.4 -0.0 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 +0.1 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 -0.2 +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 -0.0 -0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.2 +0.1 +0.0 -0.2
phage phage_bap4 +0.1 -0.2 +0.1 -0.0 -0.2
phage phage_bap4 -0.0 +0.1 +0.0 -0.0 -0.4
no phage control no phage control -0.1 +0.1 -0.0 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 -0.0 -0.5 -0.0 -0.0 +0.5
complex community Community=guar; Passage=4 -0.1 -0.2 +0.1 +0.2 -0.1
complex community Community=guar; Passage=4 -0.0 +0.2 +0.1 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.8 -0.1 +0.0 +1.0
complex community Community=arabino-guar; Passage=4 +0.0 +0.6 -0.0 +0.3 -0.8
complex community Community=Kojac gum; Passage=4 -0.1 +0.1 +0.0 -0.3 +0.5
complex community Community=arabino-guar; Passage=4 +0.0 +0.4 -0.1 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.3 +0.0 -0.2 +0.1
complex community Community=guar; Passage=4 -0.1 +0.2 +0.0 +0.1 +0.4
complex community Community=Kojac gum; Passage=1 -0.1 +0.4 +0.0 -0.0 +0.2
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