Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF99 and GFF100 overlap by 4 nucleotidesGFF100 and GFF101 are separated by 335 nucleotidesGFF101 and GFF102 are separated by 184 nucleotidesGFF102 and GFF103 are separated by 17 nucleotides GFF99 - KEGG: RNA polymerase sigma-70 factor, ECF subfamily, at 124,849 to 125,409 GFF99 GFF100 - no description, at 125,406 to 126,104 GFF100 GFF101 - Phosphate-binding DING protein (related to PstS), at 126,440 to 127,729 GFF101 GFF102 - General secretion pathway protein F, at 127,914 to 129,119 GFF102 GFF103 - General secretion pathway protein E, at 129,137 to 130,489 GFF103
Group Condition GFF99 GFF100 GFF101 GFF102 GFF103
complex community Community=arabino-guar; Passage=4 -3.1 +0.4 -0.3 -0.0 -0.9
complex community Community=Locust bean gum; Passage=4 -2.8 -0.0 -1.0 +0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.8 +0.4 -0.7 -0.0 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.7 +0.0 -0.1 -0.7
vitamin M9 with Supernatant from Cyptococcus -1.0 -0.0 -0.1 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.1 -0.1 -0.5 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.4 +0.0 -0.8 +0.3
complex community Community=Kojac gum; Passage=1 +0.1 +0.2 -0.2 -0.1 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 +0.1 +0.0 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.6 -0.5 -0.1 -0.7 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.0 +0.1 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.2 -0.1 -0.5 -0.7
phage phage_bap4 +0.2 +0.3 -0.2 +0.1 -1.1
phage phage_bap4 -0.0 +0.2 +0.3 -0.9 -0.2
complex community Community=arabino-guar; Passage=4 +0.7 -0.2 -0.3 -1.6 +0.9
complex community Community=arabino-guar; Passage=4 +0.3 -0.5 +0.3 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.2 +0.1 -0.5 -0.5
phage phage_bap4 -0.5 +0.2 -0.0 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 +0.2 -0.5 +0.3 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 -0.3 -0.0 +0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 -0.0 +0.0 -0.6 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 -0.0 -0.4 +0.7
phage phage_bap4 +0.7 -0.2 -0.1 -0.2 +0.3
no phage control no phage control -0.2 +0.2 -0.0 -0.1 +0.6
complex community Community=guar; Passage=4 +0.8 +0.2 -0.1 -0.3 -0.0
complex community Community=guar; Passage=4 +0.6 -0.1 -0.3 +0.3 +0.6
complex community Community=Kojac gum; Passage=4 +1.3 -0.3 -0.3 +0.6 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.2 +0.0 -0.2 +1.0
complex community Community=guar; Passage=4 +0.5 -0.5 +0.1 +0.6 +0.8
complex community Community=guar; Passage=4 +1.2 +0.5 +0.2 +0.2 +1.3
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