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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1003 and GFF1004 are separated by 28 nucleotides
GFF1004 and GFF1005 overlap by 1 nucleotides
GFF1005 and GFF1006 are separated by 108 nucleotides
GFF1006 and GFF1007 are separated by 29 nucleotides
GFF1003 - Rhamnogalacturonides degradation protein RhiN, at 1,001,377 to 1,002,492
GFF1003
GFF1004 - Exo-poly-alpha-D-galacturonosidase precursor (EC 3.2.1.82), at 1,002,521 to 1,004,101
GFF1004
GFF1005 - hypothetical protein, at 1,004,101 to 1,006,533
GFF1005
GFF1006 - hypothetical protein, at 1,006,642 to 1,008,156
GFF1006
GFF1007 - hypothetical protein, at 1,008,186 to 1,009,376
GFF1007
Group
Condition
GFF1003
GFF1004
GFF1005
GFF1006
GFF1007
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.6
-0.1
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.3
-0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.3
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
+0.2
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.2
+0.0
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
-0.1
+0.1
+0.2
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