Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_05070	PS417_05075	PS417_05080	PS417_05085	PS417_05090
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-3.6	-2.1	-0.1	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-3.4	-2.6	+0.4	+0.0
carbon source	Trisodium citrate (C)	-0.0	-0.1	-0.2	-0.2	-2.8
carbon source	Trisodium citrate (C)	+0.2	+0.0	-0.3	-0.3	-2.3
stress	Gentamicin 0.008 mg/ml	-0.1	-0.7	-0.5	-1.0	-0.1
seeds	Growth on radish seeds for 72 hours	-0.1	-0.4	-0.6	-0.8	+0.0
stress	Polymyxin B sulfate 0.006 mg/ml	+0.0	+0.3	+0.1	-0.2	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.3	-0.3	+0.3	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.1	-0.8	-0.3	+0.2
soil	soil sample 4; outgrowth in LB	+0.5	-0.2	-0.8	+0.5	+0.1
solid stress	Fraxetin 3 mM; solid stress	-0.5	-0.6	-0.2	+0.4	+1.0
solid stress	Fraxetin 3 mM; solid stress	-0.3	-0.3	-0.1	+0.4	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3	-0.1	+0.6	-0.5	+0.3
solid stress	Fraxetin 2 mM; solid stress	+0.1	-0.4	-0.2	+0.3	+0.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.9	+0.0	-0.3	-0.2	+0.3
root	root sample 6; outgrowth in LB	+1.0	+0.1	+0.1	-0.4	-0.1
solid stress	Fraxetin 3 mM; solid stress	+0.1	-0.4	-0.1	+0.3	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.2	+0.3	+0.9	-0.4
carbon source	L-Alanine (C)	+0.3	+0.5	+0.5	-0.4	-0.0
stress	Cobalt chloride 0.16 mM	-0.6	+1.6	+0.4	-0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	-0.0	-0.3	+0.2	+0.5
carbon source	L-Valine (C)	-0.3	+0.1	+0.4	+1.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	+0.1	+0.4	+0.6	-0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	+1.3	-0.1	+0.2	-0.1	+0.1
rhizosphere	rhizosphere sample 2; outgrowth in LB	+1.1	-0.3	+0.2	+0.4	-0.0
solid stress	Fraxetin 3 mM; solid stress	+0.2	-0.4	-0.0	+0.6	+1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.0	+0.7	+0.5	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+0.2	+0.8	+0.1	+0.1
carbon source	L-Valine (C)	-0.1	+0.6	+0.8	+0.8	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.0	+0.3	+1.2	+1.0	+0.3