Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas lactucae CFBP13502
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Top 16 experiments (either direction), sorted by average fitness
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500 nt
GEMAOFIL_00625 and GEMAOFIL_00626 overlap by 4 nucleotides
GEMAOFIL_00626 and GEMAOFIL_00627 overlap by 4 nucleotides
GEMAOFIL_00627 and GEMAOFIL_00628 are separated by 13 nucleotides
GEMAOFIL_00628 and GEMAOFIL_00629 are separated by 31 nucleotides
GEMAOFIL_00625: GEMAOFIL_00625 - hypothetical protein, at 726,871 to 727,524
_00625
GEMAOFIL_00626: GEMAOFIL_00626 - hypothetical protein, at 727,521 to 728,075
_00626
GEMAOFIL_00627: GEMAOFIL_00627 - hypothetical protein, at 728,072 to 729,043
_00627
GEMAOFIL_00628: GEMAOFIL_00628 - Type IV pilus biogenesis and competence protein PilQ, at 729,057 to 730,439
_00628
GEMAOFIL_00629: GEMAOFIL_00629 - Shikimate kinase 1, at 730,471 to 730,962
_00629
Group
Condition
GEMAOFIL
_00625
GEMAOFIL
_00626
GEMAOFIL
_00627
GEMAOFIL
_00628
GEMAOFIL
_00629
carbon source
L-Alanine (C)
-0.4
N.D.
+0.2
-0.1
N.D.
carbon source
m-Inositol (C)
+0.1
N.D.
+0.0
-0.1
N.D.
carbon source
L-Glutamine (C)
+0.2
N.D.
+0.1
-0.2
N.D.
carbon source
L-Serine (C)
+0.2
N.D.
+0.0
-0.1
N.D.
carbon source
L-Aspartic Acid (C)
-0.1
N.D.
+0.2
+0.1
N.D.
carbon source
m-Inositol (C)
+0.2
N.D.
+0.0
-0.0
N.D.
carbon source
L-Glutamine (C)
+0.0
N.D.
+0.1
+0.1
N.D.
carbon source
L-Serine (C)
+0.2
N.D.
+0.2
-0.1
N.D.
carbon source
L-Alanine (C)
+0.4
N.D.
+0.1
-0.2
N.D.
carbon source
D-Fructose (C)
+0.3
N.D.
+0.1
-0.1
N.D.
carbon source
D-Glucose (C)
+0.2
N.D.
+0.1
+0.1
N.D.
carbon source
D-Fructose (C)
+0.1
N.D.
+0.2
+0.1
N.D.
carbon source
L-Proline (C)
+0.3
N.D.
+0.3
-0.1
N.D.
carbon source
D-Glucose (C)
+0.1
N.D.
+0.3
+0.1
N.D.
carbon source
L-Proline (C)
+0.2
N.D.
+0.4
-0.1
N.D.
carbon source
L-Aspartic Acid (C)
+0.3
N.D.
+0.2
+0.2
N.D.
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