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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4541 and EX28DRAFT_4542 are separated by 186 nucleotides
EX28DRAFT_4542 and EX28DRAFT_4543 are separated by 11 nucleotides
EX28DRAFT_4543 and EX28DRAFT_4544 are separated by 49 nucleotides
EX28DRAFT_4544 and EX28DRAFT_4545 are separated by 15 nucleotides
EX28DRAFT_4541: EX28DRAFT_4541 - Uncharacterized protein conserved in bacteria, at 24,056 to 24,646
_4541
EX28DRAFT_4542: EX28DRAFT_4542 - Bacterial nucleoid DNA-binding protein, at 24,833 to 25,105
_4542
EX28DRAFT_4543: EX28DRAFT_4543 - Protein of unknown function (DUF1481), at 25,117 to 25,809
_4543
EX28DRAFT_4544: EX28DRAFT_4544 - phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 25,859 to 27,151
_4544
EX28DRAFT_4545: EX28DRAFT_4545 - AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful), at 27,167 to 28,756
_4545
Group
Condition
EX28DRAFT
_4541
EX28DRAFT
_4542
EX28DRAFT
_4543
EX28DRAFT
_4544
EX28DRAFT
_4545
stress
M9 with casaminos and trichloroethylene 76.3 uM
-1.2
-0.3
+0.4
-5.7
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.9
+0.3
+0.7
-5.7
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-0.0
+0.4
-5.8
N.D.
no stress control
M9 with sucrose; no stress control
+0.4
-0.3
+0.4
-5.8
N.D.
stress
MS_media with m-arsenite 1 mM
+0.2
-2.1
+0.0
-3.0
N.D.
stress
MS_media with m-arsenite 1 mM
+0.0
-1.9
+0.1
-3.1
N.D.
stress
MS_media with m-arsenite 1 mM
+0.1
-1.7
-0.2
-2.9
N.D.
stress
MS_media with m-arsenite 1 mM
-0.2
-1.8
+0.1
-2.8
N.D.
no stress control
M9 with sucrose; no stress control
+0.0
+0.1
+0.2
-5.0
N.D.
stress
MS_media with arsenate 5 mM
-1.3
-0.2
+0.1
-3.1
N.D.
no stress control
M9 with sucrose; no stress control
+0.1
+0.3
+0.3
-4.8
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.5
+0.2
+0.3
-3.8
N.D.
stress
MS_media with m-arsenite 1 mM
-0.2
-0.6
+0.1
-3.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.5
-0.5
+0.1
-3.9
N.D.
stress
MS_media with arsenate 5 mM
-0.4
-0.1
+0.0
-3.2
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
-0.4
+0.3
-3.6
N.D.
no stress control
MS_media no stress control
-0.1
-0.4
+0.1
-3.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.3
+0.4
-4.1
N.D.
no stress control
MS_media no stress control
+0.1
-0.1
-0.0
-3.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.2
+0.0
-2.5
N.D.
no stress control
M9 with sucrose; no stress control
+0.3
+0.0
+0.2
-3.7
N.D.
no stress control
MS_media no stress control
+0.0
-0.4
+0.3
-3.0
N.D.
no stress control
M9 with sucrose; no stress control
+0.0
+0.5
+0.4
-3.6
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
+0.2
+0.1
-2.6
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.1
+0.2
-3.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.0
-0.3
+0.4
-2.7
N.D.
no stress control
M9 with sucrose; no stress control
+0.2
-0.0
+0.2
-2.8
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.8
-0.9
+0.3
-1.8
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.9
-0.0
-2.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
+1.4
+0.6
-1.0
N.D.
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