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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4507 and EX28DRAFT_4508 are separated by 39 nucleotides
EX28DRAFT_4508 and EX28DRAFT_4509 are separated by 0 nucleotides
EX28DRAFT_4509 and EX28DRAFT_4510 are separated by 9 nucleotides
EX28DRAFT_4510 and EX28DRAFT_4511 are separated by 63 nucleotides
EX28DRAFT_4507: EX28DRAFT_4507 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases, at 73,288 to 73,989
_4507
EX28DRAFT_4508: EX28DRAFT_4508 - hypothetical protein, at 74,029 to 74,172
_4508
EX28DRAFT_4509: EX28DRAFT_4509 - fatty oxidation complex, beta subunit FadA, at 74,173 to 75,336
_4509
EX28DRAFT_4510: EX28DRAFT_4510 - fatty oxidation complex, alpha subunit FadB, at 75,346 to 77,662
_4510
EX28DRAFT_4511: EX28DRAFT_4511 - Xaa-Pro aminopeptidase, at 77,726 to 79,057
_4511
Group
Condition
EX28DRAFT
_4507
EX28DRAFT
_4508
EX28DRAFT
_4509
EX28DRAFT
_4510
EX28DRAFT
_4511
stress
MS_media with m-arsenite 1 mM
-2.5
-0.1
+0.1
+0.2
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-2.7
+0.3
-0.1
+0.2
+0.3
stress
MS_media with m-arsenite 1 mM
-2.3
+0.2
+0.1
+0.1
-0.1
stress
MS_media with arsenate 5 mM
-1.9
-0.0
+0.1
-0.1
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-2.0
+0.0
-0.2
+0.3
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-2.2
+0.1
-0.1
+0.3
+0.0
stress
MS_media with m-arsenite 1 mM
-1.8
-0.3
+0.0
+0.3
+0.0
no stress control
MS_media no stress control
-2.1
-0.3
+0.2
+0.3
+0.2
stress
MS_media with arsenate 5 mM
-1.9
+0.1
+0.0
+0.1
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-2.5
+0.6
-0.0
+0.3
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.3
+0.1
+0.3
+0.3
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-1.8
+0.2
-0.1
+0.1
+0.1
stress
MS_media with m-arsenite 1 mM
-1.7
-0.3
+0.4
+0.0
+0.2
stress
MS_media with m-arsenite 1 mM
-2.5
+0.3
+0.3
+0.5
+0.0
stress
MS_media with arsenate 5 mM
-1.5
+0.0
-0.1
+0.3
-0.0
stress
MS_media with m-arsenite 1 mM
-2.0
+0.3
+0.1
+0.3
+0.0
no stress control
MS_media no stress control
-2.0
+0.6
+0.0
+0.1
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-1.9
+0.2
-0.2
+0.5
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.7
+0.0
-0.0
+0.2
+0.4
no stress control
MS_media no stress control
-1.5
+0.5
-0.2
+0.3
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-1.5
+0.2
+0.0
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.1
+0.8
+0.4
+0.2
+0.1
stress
MS_media with arsenate 5 mM
-1.6
+0.6
+0.4
-0.1
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
-0.2
-0.3
+0.4
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.3
-0.7
+0.5
+0.8
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-1.2
+0.2
+0.1
+0.5
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-1.5
+0.4
-0.1
+0.6
+0.4
no stress control
MS_media no stress control
-1.3
+0.8
+0.2
+0.4
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
+0.5
+0.3
+0.4
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
+1.5
-0.1
+0.2
+0.3
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