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Protein
Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4502 and EX28DRAFT_4503 are separated by 2 nucleotides
EX28DRAFT_4503 and EX28DRAFT_4504 are separated by 41 nucleotides
EX28DRAFT_4504 and EX28DRAFT_4505 overlap by 4 nucleotides
EX28DRAFT_4505 and EX28DRAFT_4506 are separated by 170 nucleotides
EX28DRAFT_4502: EX28DRAFT_4502 - twin arginine-targeting protein translocase TatB, at 68,954 to 69,496
_4502
EX28DRAFT_4503: EX28DRAFT_4503 - Twin arginine targeting (Tat) protein translocase TatC, at 69,499 to 70,269
_4503
EX28DRAFT_4504: EX28DRAFT_4504 - Mg-dependent DNase, at 70,311 to 71,093
_4504
EX28DRAFT_4505: EX28DRAFT_4505 - transcription elongation factor/antiterminator RfaH, at 71,090 to 71,581
_4505
EX28DRAFT_4506: EX28DRAFT_4506 - UbiD family decarboxylase, at 71,752 to 73,245
_4506
Group
Condition
EX28DRAFT
_4502
EX28DRAFT
_4503
EX28DRAFT
_4504
EX28DRAFT
_4505
EX28DRAFT
_4506
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
-0.5
+0.3
-2.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.4
+0.0
+0.3
-2.7
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.6
-0.3
+0.0
-1.9
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
-0.3
+0.2
-2.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
-0.1
+0.4
-1.4
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.4
+0.4
-1.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-1.0
+0.5
-0.8
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.7
+0.4
-0.8
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.7
+0.4
-1.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
-0.3
+0.3
-1.4
N.D.
stress
MS_media with m-arsenite 1 mM
-0.5
-0.5
+0.2
-0.4
N.D.
stress
MS_media with m-arsenite 1 mM
-0.0
-0.4
+0.2
-1.0
N.D.
stress
MS_media with arsenate 5 mM
-0.8
-0.9
+0.1
+0.4
N.D.
stress
MS_media with arsenate 5 mM
-0.9
-0.7
+0.1
+0.4
N.D.
no stress control
MS_media no stress control
+0.2
-0.2
+0.0
-1.1
N.D.
stress
MS_media with m-arsenite 1 mM
-0.4
-0.4
+0.3
-0.4
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
-0.4
+0.4
-0.9
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.1
+0.3
-1.1
N.D.
no stress control
MS_media no stress control
+0.1
+0.0
+0.2
-1.2
N.D.
stress
MS_media with arsenate 5 mM
-0.4
-0.6
-0.1
+0.3
N.D.
stress
MS_media with arsenate 5 mM
-0.4
-0.4
+0.3
-0.2
N.D.
no stress control
MS_media no stress control
+0.3
-0.1
+0.5
-1.4
N.D.
stress
MS_media with arsenate 5 mM
-0.4
-0.8
+0.0
+0.5
N.D.
no stress control
MS_media no stress control
+0.6
-0.3
+0.2
-0.9
N.D.
stress
MS_media with arsenate 5 mM
-0.5
-0.6
+0.1
+0.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.3
+0.5
-0.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.7
-0.5
+0.4
+0.9
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
-0.3
+0.6
+0.6
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.1
+0.9
-0.7
N.D.
no stress control
M9 with sucrose; no stress control
-0.2
+0.0
+0.7
+0.7
N.D.
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