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Protein
Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4455 and EX28DRAFT_4456 are separated by 50 nucleotides
EX28DRAFT_4456 and EX28DRAFT_4457 overlap by 4 nucleotides
EX28DRAFT_4457 and EX28DRAFT_4458 overlap by 4 nucleotides
EX28DRAFT_4458 and EX28DRAFT_4459 are separated by 4 nucleotides
EX28DRAFT_4455: EX28DRAFT_4455 - Chain length determinant protein, at 21,887 to 22,933
_4455
EX28DRAFT_4456: EX28DRAFT_4456 - UDP-N-acetylglucosamine 2-epimerase, at 22,984 to 24,120
_4456
EX28DRAFT_4457: EX28DRAFT_4457 - nucleotide sugar dehydrogenase, at 24,117 to 25,379
_4457
EX28DRAFT_4458: EX28DRAFT_4458 - TDP-D-fucosamine acetyltransferase, at 25,376 to 26,053
_4458
EX28DRAFT_4459: EX28DRAFT_4459 - TDP-4-keto-6-deoxy-D-glucose transaminase, at 26,058 to 27,188
_4459
Group
Condition
EX28DRAFT
_4455
EX28DRAFT
_4456
EX28DRAFT
_4457
EX28DRAFT
_4458
EX28DRAFT
_4459
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-1.6
-2.5
N.D.
-2.8
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-1.3
-1.4
N.D.
-2.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-1.4
-1.6
N.D.
-2.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-1.4
-1.1
N.D.
-2.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-1.0
-1.9
N.D.
-1.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.6
-1.0
N.D.
-2.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-1.2
-1.4
N.D.
-1.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.6
-0.8
N.D.
-2.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
-0.4
-0.8
N.D.
-1.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.4
-0.8
N.D.
-1.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
-0.2
-0.2
N.D.
-1.9
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
-0.1
-0.8
N.D.
-1.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
-0.2
-0.7
N.D.
-1.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.4
-1.0
N.D.
-0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
-0.3
-0.2
N.D.
-1.6
stress
MS_media with arsenate 5 mM
-0.1
-0.1
-0.4
N.D.
-1.6
no stress control
M9 with sucrose; no stress control
-0.2
-0.4
-0.6
N.D.
-0.7
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.4
-0.7
N.D.
-0.7
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.4
-0.7
N.D.
-0.7
no stress control
M9 with sucrose; no stress control
-0.3
-0.5
-0.4
N.D.
-0.6
no stress control
M9 with sucrose; no stress control
-0.3
-0.1
-0.5
N.D.
-0.7
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
-0.3
-0.6
N.D.
-0.6
stress
MS_media with arsenate 5 mM
+0.2
-0.1
-0.4
N.D.
-1.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-0.1
-0.4
N.D.
-0.9
stress
MS_media with arsenate 5 mM
+0.1
+0.0
-0.2
N.D.
-1.2
stress
MS_media with arsenate 5 mM
+0.1
+0.2
+0.2
N.D.
-1.1
stress
MS_media with m-arsenite 1 mM
+0.1
+0.4
+0.7
N.D.
-0.2
stress
MS_media with m-arsenite 1 mM
-0.2
+0.5
+0.7
N.D.
+0.1
stress
MS_media with m-arsenite 1 mM
+0.1
+0.7
+0.7
N.D.
+0.1
stress
MS_media with m-arsenite 1 mM
+0.0
+0.6
+0.9
N.D.
+0.0
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